RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 TXNP10599 105 aaKnown RBP18.78■□□□□ 0.6
VCX3A-201ENST00000381089 RPS6P62753 249 aaKnown RBP18.78■□□□□ 0.6
VCX3A-201ENST00000381089 ZNF543Q08ER8 600 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 ANKRD45Q5TZF3 282 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 CCDC155Q8N6L0 562 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 CLEC4DQ8WXI8 215 aa18.78■□□□□ 0.6
VCX3A-201ENST00000381089 RNF41Q9H4P4 317 aaPredicted RBP18.78■□□□□ 0.6
VCX3A-201ENST00000381089 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.6
VCX3A-201ENST00000381089 SCN10AQ9Y5Y9 1956 aa18.77■□□□□ 0.6
VCX3A-201ENST00000381089 A6NJR5 290 aa18.77■□□□□ 0.6
VCX3A-201ENST00000381089 EDNRBP24530 442 aa18.77■□□□□ 0.6
VCX3A-201ENST00000381089 GPATCH4Q5T3I0 446 aaKnown RBP18.77■□□□□ 0.6
VCX3A-201ENST00000381089 IQCF3P0C7M6 154 aa18.76■□□□□ 0.59
VCX3A-201ENST00000381089 MFAP1P55081 439 aaKnown RBP18.76■□□□□ 0.59
VCX3A-201ENST00000381089 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
VCX3A-201ENST00000381089 MAF1Q9H063 256 aa18.76■□□□□ 0.59
VCX3A-201ENST00000381089 BAIAP3O94812 1187 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 HSPD1P10809 573 aaKnown RBP18.75■□□□□ 0.59
VCX3A-201ENST00000381089 POU3F3P20264 500 aaPredicted RBP18.75■□□□□ 0.59
VCX3A-201ENST00000381089 KCNJ6P48051 423 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 NT5C2P49902 561 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 CHMP4BP1P59074 171 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 RGS22Q8NE09 1264 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 ESR2Q92731 530 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 FAM227BQ96M60 508 aa18.75■□□□□ 0.59
VCX3A-201ENST00000381089 SCN5AQ14524 2016 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 SNHG28P0DPA3 235 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 PDE1AP54750 535 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 HAND2P61296 217 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 USH1GQ495M9 461 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 CCDC178Q5BJE1 867 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 HERC6Q8IVU3 1022 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 COPS5Q92905 334 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 COG5Q9UP83 839 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 MTCH2Q9Y6C9 303 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
VCX3A-201ENST00000381089 TANC1Q9C0D5 1861 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 TRIM6-TRIM34B2RNG4 842 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 PARNO95453 639 aaKnown RBP18.73■□□□□ 0.59
VCX3A-201ENST00000381089 PTGISQ16647 500 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 MCF2L2Q86YR7 1114 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 AFAP1L1Q8TED9 768 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 ARNTL2Q8WYA1 636 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 C1QTNF1Q9BXJ1 281 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 CERS4Q9HA82 394 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 ABCB11O95342 1321 aa18.73■□□□□ 0.59
VCX3A-201ENST00000381089 TLL1O43897 1013 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 GH1P01241 217 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 BMP1P13497 986 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 TFF2Q03403 129 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 IQCA1Q86XH1 822 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 DGKHQ86XP1 1220 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 NSUN6Q8TEA1 469 aaKnown RBP18.72■□□□□ 0.59
VCX3A-201ENST00000381089 TRANK1O15050 2925 aa18.72■□□□□ 0.59
VCX3A-201ENST00000381089 BDP1A6H8Y1 2624 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 RFXAPO00287 272 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
VCX3A-201ENST00000381089 TAP1Q03518 808 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 NMIQ13287 307 aaPredicted RBP18.71■□□□□ 0.59
VCX3A-201ENST00000381089 STXBP2Q15833 593 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 CDC37Q16543 378 aaPredicted RBP18.71■□□□□ 0.59
VCX3A-201ENST00000381089 SEPT14Q6ZU15 432 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 ZNF589Q86UQ0 364 aaPredicted RBP18.71■□□□□ 0.59
VCX3A-201ENST00000381089 SESTD1Q86VW0 696 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 IWS1Q96ST2 819 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 PRRC2BQ5JSZ5 2229 aaKnown RBP18.71■□□□□ 0.59
VCX3A-201ENST00000381089 XIRP2A4UGR9 3374 aa18.71■□□□□ 0.59
VCX3A-201ENST00000381089 TCF20Q9UGU0 1960 aaKnown RBP18.7■□□□□ 0.58
VCX3A-201ENST00000381089 ZNF213O14771 459 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 ARIH2O95376 493 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 MMP3P08254 477 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 GOLGA8HP0CJ92 632 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 DGKDQ16760 1214 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 PPP1R13LQ8WUF5 828 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 RILPL2Q969X0 211 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 ZBED2Q9BTP6 218 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 KATNAL1Q9BW62 490 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 KAT14Q9H8E8 782 aa18.7■□□□□ 0.58
VCX3A-201ENST00000381089 DHX16O60231 1041 aaKnown RBP18.69■□□□□ 0.58
VCX3A-201ENST00000381089 SELPP16109 830 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 KCNQ1P51787 676 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 CCDC62Q6P9F0 684 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 LRRC8DQ7L1W4 858 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 CHST3Q7LGC8 479 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 TBC1D10CQ8IV04 446 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 C7orf31Q8N865 590 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 PNMA1Q8ND90 353 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 HLA-CQ95604 372 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 NECAB3Q96P71 396 aaPredicted RBP18.69■□□□□ 0.58
VCX3A-201ENST00000381089 RMDN3Q96TC7 470 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 ZKSCAN3Q9BRR0 538 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 UBA5Q9GZZ9 404 aa18.69■□□□□ 0.58
VCX3A-201ENST00000381089 MRPL11Q9Y3B7 192 aaKnown RBP18.69■□□□□ 0.58
VCX3A-201ENST00000381089 REV3LO60673 3130 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 EFCAB14O75071 495 aa18.68■□□□□ 0.58
VCX3A-201ENST00000381089 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms