RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 M0R2C6 588 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 ARL6IP4Q66PJ3 421 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 NELFCDQ8IXH7 590 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 THEM5Q8N1Q8 247 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 RBSNQ9H1K0 784 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 KMT5AQ9NQR1 393 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 SEPT9Q9UHD8 586 aaPredicted RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 WDR19Q8NEZ3 1342 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 PNMA6FA0A0J9YX94 578 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 SFNP31947 248 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 ADD2P35612 726 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 PIK3CAP42336 1068 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 KRT76Q01546 638 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 ARL13BQ3SXY8 428 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 EP400NLQ6ZTU2 488 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 TSC1Q92574 1164 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 HERC5Q9UII4 1024 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 ASAP1Q9ULH1 1129 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 DAAM1Q9Y4D1 1078 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 SCP2P22307 547 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 CYP2J2P51589 502 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 LARP4BQ92615 738 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 LSM14BQ9BX40 385 aaKnown RBP7.83□□□□□ -1.16
CCDC171-201ENST00000380701 ADCY9O60503 1353 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 MAP3K4Q9Y6R4 1608 aa7.83□□□□□ -1.16
CCDC171-201ENST00000380701 PRPF3O43395 683 aaKnown RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 SLC26A4O43511 780 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 FGAP02671 866 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 XRCC6P12956 609 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 ARHGAP4P98171 946 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 MECOMQ03112 1051 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 ADAM9Q13443 819 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 SPATA1Q5VX52 437 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 CASC4Q6P4E1 433 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 RAB44Q7Z6P3 723 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 SDCCAG8Q86SQ7 713 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 TMX1Q9H3N1 280 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 USTQ9Y2C2 406 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 HYOU1Q9Y4L1 999 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 RPLP2P05387 115 aaKnown RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 STXBP2Q15833 593 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 UAP1Q16222 522 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 C1orf228Q6PIY5 440 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 PHKBQ93100 1093 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 CAPZA3Q96KX2 299 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 TTC25Q96NG3 672 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 RNF14Q9UBS8 474 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 INO80B-WBP1J3KQ70 363 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 TROVE2P10155 538 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 ARL4AP40617 200 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 PHKA1P46020 1223 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 MCM6Q14566 821 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 MAEAQ7L5Y9 396 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 EFHBQ8N7U6 833 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 URGCPQ8TCY9 931 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 NCOA5Q9HCD5 579 aaKnown RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 LMCD1Q9NZU5 365 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 ROBO2Q9HCK4 1378 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KIAA0391O15091 583 aaKnown RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 MYL7Q01449 175 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 HSP90AA4PQ58FG1 418 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 LRRC4Q9HBW1 653 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 TAB2Q9NYJ8 693 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KCNJ14Q9UNX9 436 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KCNJ18B7U540 433 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 WDR46O15213 610 aaKnown RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KRT3P12035 628 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 IFNAR1P17181 557 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 PHKA2P46019 1235 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 SH3BGRP55822 239 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KCNJ12Q14500 433 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KARSQ15046 597 aaKnown RBP7.82□□□□□ -1.16
CCDC171-201ENST00000380701 FBXO18Q8NFZ0 1043 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 MAP4K1Q92918 833 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 CEP170P1Q96L14 293 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 SLF1Q9BQI6 1058 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 MYO1AQ9UBC5 1043 aa7.82□□□□□ -1.16
CCDC171-201ENST00000380701 KDM6BO15054 1643 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 AP3M2P53677 418 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 SP8Q8IXZ3 490 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 RNF40O75150 1001 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 MORC3Q14149 939 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 RPS6KA2Q15349 733 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 KRBA2Q6ZNG9 492 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 RRAGAQ7L523 313 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 NSUN6Q8TEA1 469 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 RNF139Q8WU17 664 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 U2AF1L4Q8WU68 220 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 ANO3Q9BYT9 981 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 VCX3AQ9NNX9 186 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 EHD2Q9NZN4 543 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 KIAA1468Q9P260 1216 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 ERICH4A6NGS2 130 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 MYO1FO00160 1098 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 EXOC3L4Q17RC7 722 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 PRPF38AQ8NAV1 312 aaKnown RBP7.81□□□□□ -1.16
CCDC171-201ENST00000380701 CERKQ8TCT0 537 aa7.81□□□□□ -1.16
CCDC171-201ENST00000380701 TRIM56Q9BRZ2 755 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms