RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 UMODL1Q5DID0 1318 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 TMEM265A0A087WTH1 108 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 GRXCR1A8MXD5 290 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 ZNF213O14771 459 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 IGHDP01880 384 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 AAMPQ13685 434 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 DUSP28Q4G0W2 176 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 ESR2Q92731 530 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 TIFAQ96CG3 184 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 BOLA1Q9Y3E2 137 aa16.11■□□□□ 0.17
PCNA-202ENST00000379160 CHD9Q3L8U1 2897 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 B4GALT4O60513 344 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 PBX2P40425 430 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 CCL23P55773 120 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 RPS6P62753 249 aaKnown RBP16.1■□□□□ 0.17
PCNA-202ENST00000379160 NUCB1Q02818 461 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 USH1GQ495M9 461 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 PSRC1Q6PGN9 363 aaPredicted RBP16.1■□□□□ 0.17
PCNA-202ENST00000379160 ZNF576Q9H609 170 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 IL23AQ9NPF7 189 aa16.1■□□□□ 0.17
PCNA-202ENST00000379160 KDM4AO75164 1064 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 PDE4DQ08499 809 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 RASIP1Q5U651 963 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 UBA5Q9GZZ9 404 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 DIAPH3Q9NSV4 1193 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 LAMA4Q16363 1823 aa16.09■□□□□ 0.17
PCNA-202ENST00000379160 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 MYL3P08590 195 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
PCNA-202ENST00000379160 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
PCNA-202ENST00000379160 DGKHQ86XP1 1220 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 OR6J1Q8NGC5 347 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 EXOC6Q8TAG9 804 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 NOC4LQ9BVI4 516 aaKnown RBP16.08■□□□□ 0.16
PCNA-202ENST00000379160 SEZ6LQ9BYH1 1024 aa16.08■□□□□ 0.16
PCNA-202ENST00000379160 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
PCNA-202ENST00000379160 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
PCNA-202ENST00000379160 B4E1Z4 1266 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 FGBP02675 491 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 CPT1AP50416 773 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 PURAQ00577 322 aaKnown RBP16.07■□□□□ 0.16
PCNA-202ENST00000379160 OTOP2Q7RTS6 562 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 MPHOSPH6Q99547 160 aaKnown RBP16.07■□□□□ 0.16
PCNA-202ENST00000379160 WNT8AQ9H1J5 351 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 ALDH8A1Q9H2A2 487 aaPredicted RBP16.07■□□□□ 0.16
PCNA-202ENST00000379160 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 GPHNQ9NQX3 736 aaPredicted RBP16.07■□□□□ 0.16
PCNA-202ENST00000379160 TRMT13Q9NUP7 481 aaKnown RBP16.07■□□□□ 0.16
PCNA-202ENST00000379160 POLR3EQ9NVU0 708 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 MYO9BQ13459 2157 aa16.07■□□□□ 0.16
PCNA-202ENST00000379160 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
PCNA-202ENST00000379160 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
PCNA-202ENST00000379160 DNERQ8NFT8 737 aa16.06■□□□□ 0.16
PCNA-202ENST00000379160 PPP1R13LQ8WUF5 828 aa16.06■□□□□ 0.16
PCNA-202ENST00000379160 COPS5Q92905 334 aa16.06■□□□□ 0.16
PCNA-202ENST00000379160 SCLYQ96I15 445 aa16.06■□□□□ 0.16
PCNA-202ENST00000379160 TMEM121BQ9BXQ6 578 aaPredicted RBP16.06■□□□□ 0.16
PCNA-202ENST00000379160 SPTBN5Q9NRC6 3674 aaKnown RBP16.06■□□□□ 0.16
PCNA-202ENST00000379160 GBF1Q92538 1859 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 CYP2C9P11712 490 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 EDNRBP24530 442 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 ADGRF4Q8IZF3 695 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 ZSCAN10Q96SZ4 725 aaPredicted RBP16.05■□□□□ 0.16
PCNA-202ENST00000379160 MTG1Q9BT17 334 aaPredicted RBP16.05■□□□□ 0.16
PCNA-202ENST00000379160 MTIF3Q9H2K0 278 aaKnown RBP16.05■□□□□ 0.16
PCNA-202ENST00000379160 CHD7Q9P2D1 2997 aa16.05■□□□□ 0.16
PCNA-202ENST00000379160 TNKSO95271 1327 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 RAD50Q92878 1312 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 MYH6P13533 1939 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 HIP1O00291 1037 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
PCNA-202ENST00000379160 TXNP10599 105 aaKnown RBP16.04■□□□□ 0.16
PCNA-202ENST00000379160 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
PCNA-202ENST00000379160 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
PCNA-202ENST00000379160 FAM47CQ5HY64 1035 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
PCNA-202ENST00000379160 USP38Q8NB14 1042 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 DSCC1Q9BVC3 393 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 PRDM12Q9H4Q4 367 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 ZSWIM5Q9P217 1185 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
PCNA-202ENST00000379160 B4DLN1 442 aa16.03■□□□□ 0.16
PCNA-202ENST00000379160 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCNA-202ENST00000379160 ARIH2O95376 493 aa16.03■□□□□ 0.16
PCNA-202ENST00000379160 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
PCNA-202ENST00000379160 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
PCNA-202ENST00000379160 CHMP4BP1P59074 171 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms