RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TMCC1O94876 653 aa14.4□□□□□ -0.1
HIPK3-202ENST00000379016 PAMP19021 973 aa14.4□□□□□ -0.1
HIPK3-202ENST00000379016 K7ENM7 598 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
HIPK3-202ENST00000379016 HSPA6P17066 643 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 H7C1D1 291 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 SMC5Q8IY18 1101 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 PPM1KQ8N3J5 372 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 OR9Q1Q8NGQ5 310 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 CCDC127Q96BQ5 260 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 LZTS1Q9Y250 596 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 SNX5Q9Y5X3 404 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 KDM1AO60341 852 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 KLHL40Q2TBA0 621 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 FAM133BQ5BKY9 247 aaKnown RBP14.39□□□□□ -0.11
HIPK3-202ENST00000379016 TMED2Q15363 201 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 RWDD4Q6NW29 188 aaKnown RBP14.39□□□□□ -0.11
HIPK3-202ENST00000379016 TCP11Q8WWU5 503 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 ATP11BQ9Y2G3 1177 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 HSPA2P54652 639 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 XKR9Q5GH70 373 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 SNX2O60749 519 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 SH3BP5LQ7L8J4 393 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 SMYD3Q9H7B4 428 aa14.39□□□□□ -0.11
HIPK3-202ENST00000379016 CFAP69A5D8W1 941 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 PRKCQQ04759 706 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 CASS4Q9NQ75 786 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 SENP1Q9P0U3 644 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
HIPK3-202ENST00000379016 DMC1Q14565 340 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 CENPKQ9BS16 269 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 ANXA13P27216 316 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 IL9RQ01113 521 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 MTX1Q13505 466 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 DPP9Q86TI2 863 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 TTLL11Q8NHH1 800 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 WDR47O94967 919 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 MBD4O95243 580 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 BRAPQ7Z569 592 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 ERO1AQ96HE7 468 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 ATP6V0A4Q9HBG4 840 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 TTI1O43156 1089 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 NDUFB5O43674 189 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 SUN1O94901 812 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 RARSP54136 660 aaKnown RBP14.38□□□□□ -0.11
HIPK3-202ENST00000379016 NFATC2IPQ8NCF5 419 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.38□□□□□ -0.113e-6■■■□□ 16.3
HIPK3-202ENST00000379016 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
HIPK3-202ENST00000379016 ADCY7P51828 1080 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 NBPF15Q8N660 670 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 LRRC37BQ96QE4 947 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 MBIPQ9NS73 344 aa14.38□□□□□ -0.11
HIPK3-202ENST00000379016 ADCY3O60266 1144 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 PRDM1O75626 825 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 TRIM27P14373 513 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 TRIM32Q13049 653 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 PI4K2BG5E9Z4 385 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 XRCC5P13010 732 aaKnown RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ZSCAN20P17040 1043 aaPredicted RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ADCK5Q3MIX3 580 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 GNPTABQ3T906 1256 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ACCSLQ4AC99 568 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 TADA2BQ86TJ2 420 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 PAIP2BQ9ULR5 123 aaKnown RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 PRG4Q92954 1404 aaPredicted RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 RECQLP46063 649 aaPredicted RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ANKRD2Q9GZV1 360 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 IRS4O14654 1257 aaPredicted RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 CPA1P15085 419 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 THEMIS2Q5TEJ8 643 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 FGD2Q7Z6J4 655 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 CABP7Q86V35 215 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 THRAP3Q9Y2W1 955 aaKnown RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 CAMSAP2Q08AD1 1489 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 RASSF10A6NK89 507 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ATP2B4P23634 1241 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ARL4DP49703 201 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ADCK1Q86TW2 530 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 NDUFAF2Q8N183 169 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 PBXIP1Q96AQ6 731 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 OPTNQ96CV9 577 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 SERPINI1Q99574 410 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 MEIS3Q99687 375 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 N4BP1O75113 896 aaKnown RBP14.37□□□□□ -0.11
HIPK3-202ENST00000379016 MSH2P43246 934 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 ARHGEF18Q6ZSZ5 1173 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 KCTD6Q8NC69 237 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 RHPN1Q8TCX5 695 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 DOLKQ9UPQ8 538 aa14.37□□□□□ -0.11
HIPK3-202ENST00000379016 FGD6Q6ZV73 1430 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms