RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PRAMEF18Q5VWM3 479 aa21.85■■□□□ 1.09
SSU72-204ENST00000378726 CCDC174Q6PII3 467 aa21.85■■□□□ 1.09
SSU72-204ENST00000378726 SAMD1Q6SPF0 538 aaPredicted RBP21.85■■□□□ 1.09
SSU72-204ENST00000378726 NAP1L4Q99733 375 aaKnown RBP21.85■■□□□ 1.09
SSU72-204ENST00000378726 GINM1Q9NU53 330 aa21.85■■□□□ 1.09
SSU72-204ENST00000378726 EPS15P42566 896 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 FXR2P51116 673 aaKnown RBP eCLIP21.84■■□□□ 1.09
SSU72-204ENST00000378726 TMEM266Q2M3C6 531 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 DCAF15Q66K64 600 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 APOBEC3FQ8IUX4 373 aaKnown RBP21.84■■□□□ 1.09
SSU72-204ENST00000378726 P2RX7Q99572 595 aaKnown RBP21.84■■□□□ 1.09
SSU72-204ENST00000378726 RANBP17Q9H2T7 1088 aaKnown RBP21.84■■□□□ 1.09
SSU72-204ENST00000378726 FBXO28Q9NVF7 368 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 LRWD1Q9UFC0 647 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 OPLAHO14841 1288 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 LMOD1P29536 600 aaPredicted RBP21.84■■□□□ 1.09
SSU72-204ENST00000378726 INPP5BP32019 993 aa21.84■■□□□ 1.09
SSU72-204ENST00000378726 CCAR2Q8N163 923 aaKnown RBP21.84■■□□□ 1.09
SSU72-204ENST00000378726 GTPBP4Q9BZE4 634 aaKnown RBP21.84■■□□□ 1.09
SSU72-204ENST00000378726 SPDYE3A6NKU9 549 aa21.83■■□□□ 1.09
SSU72-204ENST00000378726 MARCH6O60337 910 aa21.83■■□□□ 1.09
SSU72-204ENST00000378726 FOSP01100 380 aaPredicted RBP21.83■■□□□ 1.09
SSU72-204ENST00000378726 PDIA5Q14554 519 aa21.83■■□□□ 1.09
SSU72-204ENST00000378726 HIRAP54198 1017 aaPredicted RBP21.83■■□□□ 1.08
SSU72-204ENST00000378726 HAS1Q92839 578 aa21.83■■□□□ 1.08
SSU72-204ENST00000378726 MMTAG2Q9BU76 263 aaKnown RBP21.83■■□□□ 1.08
SSU72-204ENST00000378726 RAB34Q9BZG1 259 aa21.83■■□□□ 1.08
SSU72-204ENST00000378726 HSD3B7Q9H2F3 369 aa21.83■■□□□ 1.08
SSU72-204ENST00000378726 CGNQ9P2M7 1197 aaKnown RBP21.83■■□□□ 1.08
SSU72-204ENST00000378726 PLCG1P19174 1290 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 SYT17Q9BSW7 474 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 KIAA1683Q9H0B3 1180 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 OGFRQ9NZT2 677 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 CYP3A7-CYP3A51PA0A087WV96 503 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 CYP3A7P24462 503 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 HOXA13P31271 388 aaPredicted RBP21.82■■□□□ 1.08
SSU72-204ENST00000378726 ARHGAP4P98171 946 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 HOOK2Q96ED9 719 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 CALML4Q96GE6 196 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 FANCLQ9NW38 375 aa21.82■■□□□ 1.08
SSU72-204ENST00000378726 ZNF215Q9UL58 517 aaPredicted RBP21.82■■□□□ 1.08
SSU72-204ENST00000378726 FMR1Q06787 632 aaKnown RBP eCLIP21.81■■□□□ 1.08
SSU72-204ENST00000378726 LRRC15Q8TF66 581 aa21.81■■□□□ 1.08
SSU72-204ENST00000378726 CRYGNQ8WXF5 182 aa21.81■■□□□ 1.08
SSU72-204ENST00000378726 LPAR1Q92633 364 aa21.81■■□□□ 1.08
SSU72-204ENST00000378726 CUEDC2Q9H467 287 aa21.81■■□□□ 1.08
SSU72-204ENST00000378726 KBTBD4Q9NVX7 518 aa21.81■■□□□ 1.08
SSU72-204ENST00000378726 GGA3Q9NZ52 723 aa21.81■■□□□ 1.08
SSU72-204ENST00000378726 PIK3CDO00329 1044 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 GSDMDP57764 484 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 ENOX1Q8TC92 643 aaKnown RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 GJA10Q969M2 543 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.8■■□□□ 1.08
SSU72-204ENST00000378726 ZNF112Q9UJU3 913 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 PCDHA12Q9UN75 941 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 V9GYY5 206 aaPredicted RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 WDR46O15213 610 aaKnown RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 ERCC5P28715 1186 aaPredicted RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 CT47A1Q5JQC4 288 aaPredicted RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 TBC1D5Q92609 795 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 XPO4Q9C0E2 1151 aaKnown RBP21.8■■□□□ 1.08
SSU72-204ENST00000378726 KCND1Q9NSA2 647 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 SRCAPQ6ZRS2 3230 aa21.8■■□□□ 1.08
SSU72-204ENST00000378726 POTEMA6NI47 508 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 CFBP00751 764 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 RPN1P04843 607 aaKnown RBP21.79■■□□□ 1.08
SSU72-204ENST00000378726 ATP1A3P13637 1013 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 MOXD1Q6UVY6 613 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 PRPF38AQ8NAV1 312 aaKnown RBP21.79■■□□□ 1.08
SSU72-204ENST00000378726 ZKSCAN4Q969J2 545 aaPredicted RBP21.79■■□□□ 1.08
SSU72-204ENST00000378726 MBOAT7Q96N66 472 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 IFNKQ9P0W0 207 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 FZD1Q9UP38 647 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 MRPL11Q9Y3B7 192 aaKnown RBP21.79■■□□□ 1.08
SSU72-204ENST00000378726 CD44P16070 742 aaKnown RBP21.79■■□□□ 1.08
SSU72-204ENST00000378726 SREBF1P36956 1147 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 FANCCQ00597 558 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 DGKZQ13574 1117 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 FCHSD1Q86WN1 690 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 LDHDQ86WU2 507 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 SMYD4Q8IYR2 804 aaPredicted RBP21.79■■□□□ 1.08
SSU72-204ENST00000378726 MED15Q96RN5 788 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 WRNIP1Q96S55 665 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 RMND1Q9NWS8 449 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 RNF181Q9P0P0 153 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 IMPACTQ9P2X3 320 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 MYH7BA7E2Y1 1941 aa21.79■■□□□ 1.08
SSU72-204ENST00000378726 PPP1R3GB7ZBB8 358 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 MYL1P05976 194 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 SPP2Q13103 211 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 KRT79Q5XKE5 535 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 TRMT44Q8IYL2 757 aaKnown RBP21.78■■□□□ 1.08
SSU72-204ENST00000378726 SCYL3Q8IZE3 742 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 UIMC1Q96RL1 719 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 MAGEF1Q9HAY2 307 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 DDX41Q9UJV9 622 aaKnown RBP21.78■■□□□ 1.08
SSU72-204ENST00000378726 GCOM1H8Y6P7 765 aaPredicted RBP21.78■■□□□ 1.08
SSU72-204ENST00000378726 POLR2MP0CAP2 368 aa21.78■■□□□ 1.08
SSU72-204ENST00000378726 KLHL10Q6JEL2 608 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms