RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 SCARF1Q14162 830 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 LLGL1Q15334 1064 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 NUGGCQ68CJ6 796 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 B4GALNT2Q8NHY0 566 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 PRMT1Q99873 361 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ADAMTS1Q9UHI8 967 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 UTP11Q9Y3A2 253 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ADGRB3O60242 1522 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 TRAPPC3O43617 180 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 MBD4O95243 580 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 RAD23BP54727 409 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 DYMQ7RTS9 669 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 TRPM8Q7Z2W7 1104 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ARMC9Q7Z3E5 817 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 FANCBQ8NB91 859 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 GDAP1Q8TB36 358 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 SH2D4AQ9H788 454 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 TMBIM4Q9HC24 238 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 AATFQ9NY61 560 aaKnown RBP eCLIP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 LRRC53A6NM62 1247 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 PP2D1A8MPX8 630 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 A8MUI8 341 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 DCDC2CA8MYV0 355 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 CETN3O15182 167 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 PYGLP06737 847 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 PMS1P54277 932 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 PLTPP55058 493 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 TSNAXIP1Q2TAA8 658 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 SLC9C1Q4G0N8 1177 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 SPTY2D1Q68D10 685 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 LRRC34Q8IZ02 419 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 CCHCR1Q8TD31 782 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 TBC1D5Q92609 795 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 HPS3Q969F9 1004 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 XPO6Q96QU8 1125 aaKnown RBP11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 DLGAP2Q9P1A6 1054 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF532Q9HCE3 1301 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 MROH2AA6NES4 1674 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 PTPRMP28827 1452 aa11.56□□□□□ -0.56
ARHGEF39-201ENST00000378387 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 RASSF10A6NK89 507 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 UBOX5O94941 541 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 IFNAR1P17181 557 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 EEF1GP26641 437 aaKnown RBP11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 CAVIN3Q969G5 261 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 KANSL2Q9H9L4 492 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 BMP15O95972 392 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 GRIK3Q13003 919 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 MTMR3Q13615 1198 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 DENND2CQ68D51 928 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 CATIPQ7Z7H3 387 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 HOOK3Q86VS8 718 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 DNAAF5Q86Y56 855 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 ARHGEF2Q92974 986 aaKnown RBP11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 TRIM7Q9C029 511 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 VCXQ9H320 206 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 CWC25Q9NXE8 425 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 BIRC3Q13489 604 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 NT5DC1Q5TFE4 455 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 TMEM154Q6P9G4 183 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF654Q8IZM8 581 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 RASGRP4Q8TDF6 673 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 ETNK1Q9HBU6 452 aa11.55□□□□□ -0.56
ARHGEF39-201ENST00000378387 BAZ2BQ9UIF8 2168 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 BICDL2A1A5D9 508 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 STXBP3O00186 592 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 CNGA1P29973 690 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 RPS6KA3P51812 740 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 KLHL30Q0D2K2 578 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ANKRD20A2Q5SQ80 823 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ANKRD20A1Q5TYW2 823 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ANKRD20A3Q5VUR7 823 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF449Q6P9G9 518 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 GBP5Q96PP8 586 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 DNAJC7Q99615 494 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 TCP11L1Q9NUJ3 509 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZC3H13Q5T200 1668 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 KRT23Q9C075 422 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 TMX4Q9H1E5 349 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ABCF3Q9NUQ8 709 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 CNOT8Q9UFF9 292 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ARAP3Q8WWN8 1544 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 METP08581 1390 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 CCDC160A6NGH7 325 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 RTN2O75298 545 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 SUN1O94901 812 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms