RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 USP17L10C9JJH3 530 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 PRPHP41219 470 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 DDR1Q08345 913 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 SV2BQ7L1I2 683 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 CALML4Q96GE6 196 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 MTMR9Q96QG7 549 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 C7orf25Q9BPX7 421 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 CRACR2AQ9BSW2 395 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 ROBO3Q96MS0 1386 aa16.81■□□□□ 0.28
DFFB-204ENST00000378206 IL1R1P14778 569 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 CYP2C19P33261 490 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 GALNT17Q6IS24 598 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
DFFB-204ENST00000378206 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 JAKMIP2Q96AA8 810 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 CDK5RAP3Q96JB5 506 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 MLXIPQ9HAP2 919 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 EHD2Q9NZN4 543 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 L1RE1Q9UN81 338 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 HNRNPH2P55795 449 aaKnown RBP16.8■□□□□ 0.28
DFFB-204ENST00000378206 DDX12PQ92771 950 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 JADE2Q9NQC1 790 aa16.8■□□□□ 0.28
DFFB-204ENST00000378206 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
DFFB-204ENST00000378206 A0A1W2PQC6 194 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 MATR3P43243 847 aaKnown RBP eCLIP16.79■□□□□ 0.28
DFFB-204ENST00000378206 DNA2P51530 1060 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 TRIM14Q14142 442 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 NELFCDQ8IXH7 590 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 VPS18Q9P253 973 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 ADAM21Q9UKJ8 722 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
DFFB-204ENST00000378206 LRRIQ3A6PVS8 624 aaPredicted RBP16.79■□□□□ 0.28
DFFB-204ENST00000378206 MARCH6O60337 910 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
DFFB-204ENST00000378206 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 NLRC4Q9NPP4 1024 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 USP40Q9NVE5 1235 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 ARHGAP20Q9P2F6 1191 aa16.79■□□□□ 0.28
DFFB-204ENST00000378206 LAD1O00515 517 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 MAP2K7O14733 419 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 ADCY7P51828 1080 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 RRAGAQ7L523 313 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 RIN2Q8WYP3 895 aaPredicted RBP16.78■□□□□ 0.28
DFFB-204ENST00000378206 AK8Q96MA6 479 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 SAR1BQ9Y6B6 198 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 E9PMD0 336 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 TOM1O60784 492 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 ATP2B4P23634 1241 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 STAT3P40763 770 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 EZH2Q15910 746 aaKnown RBP16.78■□□□□ 0.28
DFFB-204ENST00000378206 SKIDA1Q1XH10 827 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 HAS1Q92839 578 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 NDST4Q9H3R1 872 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 HAUS4Q9H6D7 363 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 MYBL2P10244 700 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 BRD3Q15059 726 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 DNAAF5Q86Y56 855 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 ZNHIT6Q9NWK9 470 aaKnown RBP16.78■□□□□ 0.28
DFFB-204ENST00000378206 SALL4Q9UJQ4 1053 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 CAPN6Q9Y6Q1 641 aa16.78■□□□□ 0.28
DFFB-204ENST00000378206 LMAN1P49257 510 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 ZBED6P86452 979 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 ARID5AQ03989 594 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 MSANTD4Q8NCY6 345 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 HDAC7Q8WUI4 952 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 RAB21Q9UL25 225 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.28
DFFB-204ENST00000378206 NCK2O43639 380 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 MOCS3O95396 460 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.27
DFFB-204ENST00000378206 CASP8Q14790 479 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 MEA1Q16626 185 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 CENPPQ6IPU0 288 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 COG1Q8WTW3 980 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 RBM17Q96I25 401 aaKnown RBP16.77■□□□□ 0.27
DFFB-204ENST00000378206 FAN1Q9Y2M0 1017 aa16.77■□□□□ 0.27
DFFB-204ENST00000378206 BICDL2A1A5D9 508 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 AMPD3Q01432 767 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 C2orf54Q08AI8 447 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 WHAMMP3Q1A5X7 153 aa16.76■□□□□ 0.27
DFFB-204ENST00000378206 CNNM4Q6P4Q7 775 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms