RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PRR5LQ6MZQ0 368 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 CCDC26Q8TAB7 109 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 ZNF577Q9BSK1 485 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 NUCKS1Q9H1E3 243 aaKnown RBP14.54□□□□□ -0.08
NPHP4-203ENST00000378169 IKBKGQ9Y6K9 419 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L10C9JJH3 530 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 CD19P15391 556 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 RASSF7Q02833 373 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 NCBP1Q09161 790 aaKnown RBP14.54□□□□□ -0.08
NPHP4-203ENST00000378169 TRPC3Q13507 836 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 EXOC3L4Q17RC7 722 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 GBP6Q6ZN66 633 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 PPM1KQ8N3J5 372 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 MAGEF1Q9HAY2 307 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 RWDD2AQ9UIY3 292 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 USTQ9Y2C2 406 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 IVNS1ABPQ9Y6Y0 642 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 NEURL4Q96JN8 1562 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 ADRA2BP18089 450 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 SARM1Q6SZW1 724 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 ARHGAP27Q6ZUM4 889 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 ADAT2Q7Z6V5 191 aaKnown RBP14.53□□□□□ -0.08
NPHP4-203ENST00000378169 GPR161Q8N6U8 529 aaKnown RBP14.53□□□□□ -0.08
NPHP4-203ENST00000378169 PLCD4Q9BRC7 762 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 ANO3Q9BYT9 981 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 BHMT2Q9H2M3 363 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 SUGCTQ9HAC7 445 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 BAZ2BQ9UIF8 2168 aaKnown RBP14.53□□□□□ -0.08
NPHP4-203ENST00000378169 KCNK3O14649 394 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 AKR1B1P15121 316 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-203ENST00000378169 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 FAM76AQ8TAV0 307 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 MTA3Q9BTC8 594 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 SPTLC3Q9NUV7 552 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 CSADQ9Y600 493 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 SFI1A8K8P3 1242 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 AOC3Q16853 763 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 MICALCLQ6ZW33 695 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 FOXP4Q8IVH2 680 aaPredicted RBP14.53□□□□□ -0.08
NPHP4-203ENST00000378169 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 STK17AQ9UEE5 414 aa14.53□□□□□ -0.08
NPHP4-203ENST00000378169 MTRF1LQ9UGC7 380 aaKnown RBP14.53□□□□□ -0.08
NPHP4-203ENST00000378169 EZRP15311 586 aaKnown RBP14.52□□□□□ -0.08
NPHP4-203ENST00000378169 EAPPQ56P03 285 aaPredicted RBP14.52□□□□□ -0.08
NPHP4-203ENST00000378169 DCAF15Q66K64 600 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 ARMCX5Q6P1M9 558 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 DDX41Q9UJV9 622 aaKnown RBP14.52□□□□□ -0.08
NPHP4-203ENST00000378169 EFCAB8A8MWE9 144 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 KRT19P08727 400 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 PLA2G4BP0C869 781 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 ZRSR2Q15696 482 aaKnown RBP14.52□□□□□ -0.08
NPHP4-203ENST00000378169 INTS5Q6P9B9 1019 aaKnown RBP14.52□□□□□ -0.08
NPHP4-203ENST00000378169 PODNQ7Z5L7 613 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 TTLL6Q8N841 843 aa14.52□□□□□ -0.08
NPHP4-203ENST00000378169 MYO5BQ9ULV0 1848 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 OAS2P29728 719 aaKnown RBP14.52□□□□□ -0.09
NPHP4-203ENST00000378169 ITSN1Q15811 1721 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 CCDC93Q567U6 631 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 METTL16Q86W50 562 aaKnown RBP14.52□□□□□ -0.09
NPHP4-203ENST00000378169 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
NPHP4-203ENST00000378169 EMILIN3Q9NT22 766 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 ORC4O43929 436 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 PRCPP42785 496 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 EHHADHQ08426 723 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 NBPF11Q86T75 865 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 HPS5Q9UPZ3 1129 aa14.52□□□□□ -0.09
NPHP4-203ENST00000378169 TEX33O43247 280 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 ZMYND10O75800 440 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 CCDC77Q9BR77 488 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 MXD3Q9BW11 206 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 CDC23Q9UJX2 597 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 TMEM179Q6ZVK1 233 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 IFT20Q8IY31 132 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 NEDD1Q8NHV4 660 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 DEPTORQ8TB45 409 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 TBC1D16Q8TBP0 767 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 PIGOQ8TEQ8 1089 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 DDX12PQ92771 950 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 GOLGA6BA6NDN3 693 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 USP27XA6NNY8 438 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 ZBTB5O15062 677 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 TDP2O95551 362 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 EIF2AK2P19525 551 aaKnown RBP14.51□□□□□ -0.09
NPHP4-203ENST00000378169 RCAN1P53805 252 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 NAA30Q147X3 362 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-203ENST00000378169 WHAMMP3Q1A5X7 153 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 TCP11X2Q5H9J9 407 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 NAA35Q5VZE5 725 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 MCF2L2Q86YR7 1114 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 MRRFQ96E11 262 aaKnown RBP14.51□□□□□ -0.09
NPHP4-203ENST00000378169 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
NPHP4-203ENST00000378169 METTL14Q9HCE5 456 aaKnown RBP14.51□□□□□ -0.09
NPHP4-203ENST00000378169 H2AFZP0C0S5 128 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms