RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 OTULINQ96BN8 352 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 HAUS8Q9BT25 410 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 RASSF4Q9H2L5 321 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 GOLGA8IPA6NC78 632 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 GOLGA8JA6NMD2 632 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 TTC4O95801 387 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 DDIT3P35638 169 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 ZNF75DP51815 510 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 ADAM9Q13443 819 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 DARS2Q6PI48 645 aaKnown RBP17.77■□□□□ 0.44
RGP1-201ENST00000378078 THOC1Q96FV9 657 aaKnown RBP17.77■□□□□ 0.44
RGP1-201ENST00000378078 KMT5AQ9NQR1 393 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 RAD50Q92878 1312 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 MYBP10242 640 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 TEX2Q8IWB9 1127 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 COG4Q9H9E3 785 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.77■□□□□ 0.44
RGP1-201ENST00000378078 UHRF1BP1LA0JNW5 1464 aa17.77■□□□□ 0.44
RGP1-201ENST00000378078 GPC4O75487 556 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 RPSAP08865 295 aaKnown RBP17.77■□□□□ 0.43
RGP1-201ENST00000378078 NCF2P19878 526 aaPredicted RBP17.77■□□□□ 0.43
RGP1-201ENST00000378078 PPP1R2P41236 205 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 ACCSLQ4AC99 568 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 PNMA2Q9UL42 364 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 CFLARO15519 480 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 ARHGAP4P98171 946 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 MCF2L2Q86YR7 1114 aa17.77■□□□□ 0.43
RGP1-201ENST00000378078 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.43
RGP1-201ENST00000378078 VGLL3A8MV65 326 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 INHBAP08476 426 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 ASPHQ12797 758 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 DSTYKQ6XUX3 929 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 EEF1B2P24534 225 aaKnown RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 CXCR5P32302 372 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 GNGT1P63211 74 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 PIP4K2CQ8TBX8 421 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 SLC13A4Q9UKG4 626 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 PPFIA2O75334 1257 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 CPP00450 1065 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 CLTAP09496 248 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 ODR4Q5SWX8 454 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 CALN1Q9BXU9 219 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 H3BRJ5 948 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 MYL1P05976 194 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 ARMC9Q7Z3E5 817 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 TRIM59Q8IWR1 403 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.76■□□□□ 0.43
RGP1-201ENST00000378078 GRK7Q8WTQ7 553 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 VCX3AQ9NNX9 186 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 NEMP1O14524 444 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 CCND2P30279 289 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 RPS8P62241 208 aaKnown RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 ZKSCAN8Q15776 578 aaPredicted RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 RSBN1LQ6PCB5 846 aaPredicted RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 SLFN12Q8IYM2 578 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 ARPP21Q9UBL0 812 aaPredicted RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 SLC12A6Q9UHW9 1150 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 ORC6Q9Y5N6 252 aa17.76■□□□□ 0.43
RGP1-201ENST00000378078 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
RGP1-201ENST00000378078 PMLP29590 882 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 BASP1P80723 227 aaKnown RBP17.75■□□□□ 0.43
RGP1-201ENST00000378078 KCNQ3O43525 872 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 RNF40O75150 1001 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 PIDD1Q9HB75 910 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 CHRNDQ07001 517 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 TFDP1Q14186 410 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 ENC1O14682 589 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 HOXA13P31271 388 aaPredicted RBP17.75■□□□□ 0.43
RGP1-201ENST00000378078 LRRC24Q50LG9 513 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 CYP4F22Q6NT55 531 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 PNMA1Q8ND90 353 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 LZTS2Q9BRK4 669 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 CAPN7Q9Y6W3 813 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 RNF139Q8WU17 664 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 OGFRQ9NZT2 677 aa17.75■□□□□ 0.43
RGP1-201ENST00000378078 PI4K2BG5E9Z4 385 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 CACNB2Q08289 660 aaPredicted RBP17.74■□□□□ 0.43
RGP1-201ENST00000378078 RNF219Q5W0B1 726 aaPredicted RBP17.74■□□□□ 0.43
RGP1-201ENST00000378078 RETREG2Q8NC44 543 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 NSFP46459 744 aaKnown RBP17.74■□□□□ 0.43
RGP1-201ENST00000378078 OR6B2Q6IFH4 312 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 LRRC8CQ8TDW0 803 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 TTC25Q96NG3 672 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 ATP8A2Q9NTI2 1148 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 CAPRIN1Q14444 709 aaKnown RBP17.74■□□□□ 0.43
RGP1-201ENST00000378078 KIF19Q2TAC6 998 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 SPOPLQ6IQ16 392 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 AFG1LQ8WV93 481 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 XPO4Q9C0E2 1151 aaKnown RBP17.74■□□□□ 0.43
RGP1-201ENST00000378078 PCDHA1Q9Y5I3 950 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 SRGAP2BP0DMP2 458 aa17.74■□□□□ 0.43
RGP1-201ENST00000378078 UBE2SQ16763 222 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms