RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 DUX4L6P0CJ89 424 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 DUX4L7P0CJ90 424 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 TAP1Q03518 808 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 PLS1Q14651 629 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 DCAF17Q5H9S7 520 aaPredicted RBP6.55□□□□□ -1.36
CUBN-202ENST00000377833 POTEBQ6S5H4 581 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 CATSPER1Q8NEC5 780 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 GINM1Q9NU53 330 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 DUX4Q9UBX2 424 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 TMEM247A6NEH6 219 aa6.55□□□□□ -1.36
CUBN-202ENST00000377833 HEXIM1O94992 359 aaKnown RBP6.55□□□□□ -1.36
CUBN-202ENST00000377833 LDHAP00338 332 aaKnown RBP6.55□□□□□ -1.36
CUBN-202ENST00000377833 ALDH8A1Q9H2A2 487 aaPredicted RBP6.55□□□□□ -1.36
CUBN-202ENST00000377833 RSPH10B2B2RC85 870 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MEIS1O00470 390 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 RSPH10BP0C881 870 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 POLR2MP0CAP2 368 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 IL13P35225 146 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 DHX58Q96C10 678 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 TEKT3Q9BXF9 490 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 INO80BQ9C086 356 aaPredicted RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 RSPH14Q9UHP6 348 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 SRPRBQ9Y5M8 271 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 KRT5P13647 590 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 HSPA2P54652 639 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MCM6Q14566 821 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 CEP120Q8N960 986 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 SNX29Q8TEQ0 813 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 TECPR2O15040 1411 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 KRT38O76015 456 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 GFPT2O94808 682 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 PAMP19021 973 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MFAP3P55082 362 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 ICA1Q05084 483 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MTBPQ96DY7 904 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 PSTPIP2Q9H939 334 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 POLE3Q9NRF9 147 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 DDX41Q9UJV9 622 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 HOXB6P17509 224 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 CYP2C19P33261 490 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MTX1Q13505 466 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 XAGE2Q96GT9 111 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 CABS1Q96KC9 395 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 BRIP1Q9BX63 1249 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 EHD2Q9NZN4 543 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 NEURL1BA8MQ27 555 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
CUBN-202ENST00000377833 TNFAIP3P21580 790 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 FAM196AQ6ZSG2 479 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 ZNF354CQ86Y25 554 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 SH3TC2Q8TF17 1288 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 ZNF622Q969S3 477 aaKnown RBP eCLIP6.54□□□□□ -1.36
CUBN-202ENST00000377833 DNAJC25Q9H1X3 360 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 KIF9Q9HAQ2 790 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 IFNKQ9P0W0 207 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 SLC12A6Q9UHW9 1150 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 PDS5AQ29RF7 1337 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 SH3BP5O60239 455 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 SUN1O94901 812 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 PYGLP06737 847 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 TRIM72Q6ZMU5 477 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 FBXO18Q8NFZ0 1043 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MPP6Q9NZW5 540 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 NFE2L3Q9Y4A8 694 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 UBAP1LF5GYI3 381 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 HNRNPDLO14979 420 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 BBOX1O75936 387 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 CHEK2O96017 543 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 SERPINB2P05120 415 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 KCTD2Q14681 263 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 KIAA0825Q8IV33 1275 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MCPH1Q8NEM0 835 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 BCCIPQ9P287 314 aaKnown RBP eCLIP6.54□□□□□ -1.36
CUBN-202ENST00000377833 MYH9P35579 1960 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 PATL1Q86TB9 770 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 PBKQ96KB5 322 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 ACTR5Q9H9F9 607 aaPredicted RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 TRIM33Q9UPN9 1127 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 ADGRB2O60241 1585 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 PODXLO00592 558 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 MCF2LO15068 1137 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 RNF8O76064 485 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 BRD1O95696 1058 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 GTF2A1P52655 376 aaPredicted RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 PTK2Q05397 1052 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 PDE4DQ08499 809 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 XRRA1Q6P2D8 792 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 TADA2BQ86TJ2 420 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 DIS3L2Q8IYB7 885 aaKnown RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 TTC13Q8NBP0 860 aa6.54□□□□□ -1.36
CUBN-202ENST00000377833 TOPORSQ9NS56 1045 aaPredicted RBP6.54□□□□□ -1.36
CUBN-202ENST00000377833 FKBP3Q00688 224 aaKnown RBP6.53□□□□□ -1.36
CUBN-202ENST00000377833 MIER3Q7Z3K6 550 aa6.53□□□□□ -1.36
CUBN-202ENST00000377833 TMCO5AQ8N6Q1 288 aa6.53□□□□□ -1.36
CUBN-202ENST00000377833 C3orf20Q8ND61 904 aa6.53□□□□□ -1.36
CUBN-202ENST00000377833 SELENOSQ9BQE4 189 aa6.53□□□□□ -1.36
CUBN-202ENST00000377833 VEZTQ9HBM0 779 aa6.53□□□□□ -1.36
CUBN-202ENST00000377833 PSMA4P25789 261 aaKnown RBP6.53□□□□□ -1.36
CUBN-202ENST00000377833 PCGF5Q86SE9 256 aa6.53□□□□□ -1.36
CUBN-202ENST00000377833 TCP11Q8WWU5 503 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms