RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 GNAQP50148 359 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 SNX17Q15036 470 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 SCFD2Q8WU76 684 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 MAP3K14Q99558 947 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 GDF15Q99988 308 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 A0A0U1RQG5 324 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 DCDC2CA8MYV0 355 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 GCOM1H8Y6P7 765 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 CLTBP09497 229 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 TXNP10599 105 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 MYCLP12524 364 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 EDNRBP24530 442 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 TTLL4Q14679 1199 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 STXBP2Q15833 593 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 COPS5Q92905 334 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 JAKMIP1Q96N16 626 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 PXMP2Q9NR77 195 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 MROH7Q68CQ1 1323 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 OPLAHO14841 1288 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 CTAGE5O15320 804 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 MYL3P08590 195 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 CPA1P15085 419 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 CPT1AP50416 773 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 HSD17B4P51659 736 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 ERICH6BQ5W0A0 696 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 SPZ1Q9BXG8 430 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 MAF1Q9H063 256 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 TMEM39AQ9NV64 488 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 Q9Y3F1 56 aa13.38□□□□□ -0.27
SMARCE1-203ENST00000377808 ELP1O95163 1332 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 TRIM43BA6NCK2 446 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 GOLGA8BA8MQT2 603 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 ZBTB43O43298 467 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 CABYRO75952 493 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 NR3C2P08235 984 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 RAG1P15918 1043 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 BMP8BP34820 402 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 HSPA4P34932 840 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 CHMP4BP1P59074 171 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 PSMC6P62333 389 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 LY6KQ17RY6 165 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 BADQ92934 168 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 CUL5Q93034 780 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
SMARCE1-203ENST00000377808 A0A1W2PPC1 479 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 ARVCFO00192 962 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 NKRFO15226 690 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 ARIH2O95376 493 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 KCNA4P22459 653 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 ITGA7Q13683 1181 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 RTN1Q16799 776 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 TSGA10IPQ3SY00 556 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 APOA5Q6Q788 366 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 Q6ZUG5 572 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 PDCD2LQ9BRP1 358 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 POLR3EQ9NVU0 708 aa13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 RBM28Q9NW13 759 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-203ENST00000377808 TRIOBPQ9H2D6 2365 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 SORBS3O60504 671 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 EIF3JO75822 258 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 SLC34A2O95436 690 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 SMARCA1P28370 1054 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 CCND2P30279 289 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 NKX3-2P78367 333 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms