RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 ZNHIT6Q9NWK9 470 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 LRRC37AA6NMS7 1700 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 SLC37A4O43826 429 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 OAS2P29728 719 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 KLK7P49862 253 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 TMEM119Q4V9L6 283 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 CCDC122Q5T0U0 273 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 LARP4BQ92615 738 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 FRMPD2Q68DX3 1309 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 KRT86O43790 486 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 ERLIN1O75477 346 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 AKR1B1P15121 316 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 MTIF2P46199 727 aaKnown RBP13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 LRRC63Q05C16 580 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 PSMD2Q13200 908 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 HDXQ7Z353 690 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 RAD54LQ92698 747 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 COA7Q96BR5 231 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 LRRC27Q9C0I9 530 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 COA1Q9GZY4 146 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
TNFRSF9-201ENST00000377507 ANO9A1A5B4 782 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 RCCD1A6NED2 376 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 LCA5LO95447 670 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 TDP2O95551 362 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 TTLL1O95922 423 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 MCM6Q14566 821 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 FKBP15Q5T1M5 1219 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 NOA1Q8NC60 698 aaKnown RBP13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 HPS3Q969F9 1004 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 GJD4Q96KN9 370 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 LACRTQ9GZZ8 138 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 SLC39A2Q9NP94 309 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 SAR1BQ9Y6B6 198 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 QSER1Q2KHR3 1735 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 FGFR1OPO95684 399 aaKnown RBP13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 VSNL1P62760 191 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 GTF2IP78347 998 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 SEPT2Q15019 361 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 NCAPH2Q6IBW4 605 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 JAKMIP2Q96AA8 810 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 EEF2KMTQ96G04 330 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 NDST4Q9H3R1 872 aa13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 ZCCHC17Q9NP64 241 aaKnown RBP13.09□□□□□ -0.31
TNFRSF9-201ENST00000377507 SPATA31A6Q5VVP1 1343 aa13.08□□□□□ -0.31
TNFRSF9-201ENST00000377507 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 PPP1R11O60927 126 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 VAV2P52735 878 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 DDR1Q08345 913 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 MAN2A1Q16706 1144 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 HYIQ5T013 277 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 KRT79Q5XKE5 535 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 KIAA1328Q86T90 577 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 CCDC84Q86UT8 332 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 ADGRF4Q8IZF3 695 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 HAS1Q92839 578 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 SERPINB13Q9UIV8 391 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 TFR2Q9UP52 801 aa13.08□□□□□ -0.32
TNFRSF9-201ENST00000377507 POTEMA6NI47 508 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 H3BQF6 201 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 ZNF263O14978 683 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 IPO7O95373 1038 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 RHOXF2BP0C7M4 288 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 SHMT1P34896 483 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 USP14P54578 494 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 PROM2Q8N271 834 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 RHOXF2Q9BQY4 288 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 TSGA10Q9BZW7 698 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms