RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 NFAT5O94916 1531 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 MON2Q7Z3U7 1717 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 FLOT1O75955 427 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 KRT83P78385 493 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 SEC23AQ15436 765 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 TMTC1Q8IUR5 882 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 LRRN4CLQ8ND94 238 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 ZNF668Q96K58 619 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-203ENST00000376619 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.35□□□□□ -0.43
HDAC6-203ENST00000376619 F5H6K3 240 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 KLRC3Q07444 240 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
HDAC6-203ENST00000376619 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
HDAC6-203ENST00000376619 A0A0U1RQJ8 604 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 EXOC3O60645 756 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 LRRN2O75325 713 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 QRICH1Q2TAL8 776 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 ATRIPQ8WXE1 791 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 PLSCR1O15162 318 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 ECE2O60344 883 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 KLHL30Q0D2K2 578 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 TTC19Q6DKK2 380 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-203ENST00000376619 VPS36Q86VN1 386 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 PROCA1Q8NCQ7 364 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-203ENST00000376619 TLDC2A0PJX2 215 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 ARHGEF35A5YM69 484 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 H7C1D1 291 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 ZEB2O60315 1214 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 STX10O60499 249 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 BMP6P22004 513 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 FAM83BQ5T0W9 1011 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 ZNF658Q5TYW1 1059 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-203ENST00000376619 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 AGPAT5Q9NUQ2 364 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 BARHL2Q9NY43 387 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 FZD1Q9UP38 647 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 RFX7Q2KHR2 1363 aa12.34□□□□□ -0.43
HDAC6-203ENST00000376619 SLIT3O75094 1523 aa12.33□□□□□ -0.43
HDAC6-203ENST00000376619 KIF20AO95235 890 aa12.33□□□□□ -0.43
HDAC6-203ENST00000376619 EIF2AK2P19525 551 aaKnown RBP12.33□□□□□ -0.43
HDAC6-203ENST00000376619 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.43
HDAC6-203ENST00000376619 TCP11X2Q5H9J9 407 aa12.33□□□□□ -0.43
HDAC6-203ENST00000376619 SARM1Q6SZW1 724 aa12.33□□□□□ -0.43
HDAC6-203ENST00000376619 P2RX5Q93086 422 aa12.33□□□□□ -0.43
HDAC6-203ENST00000376619 NR2F2P24468 414 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 GSPT2Q8IYD1 628 aaKnown RBP12.33□□□□□ -0.44
HDAC6-203ENST00000376619 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 ANKRD26Q9UPS8 1709 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
HDAC6-203ENST00000376619 SLC7A5Q01650 507 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-203ENST00000376619 AMNQ9BXJ7 453 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 PI4KBQ9UBF8 816 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 ADAMTS1Q9UHI8 967 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 H0YHG0 523 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 KRT13P13646 458 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 ATP2C1P98194 919 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-203ENST00000376619 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
HDAC6-203ENST00000376619 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
HDAC6-203ENST00000376619 HGSO14964 777 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CYTH3O43739 400 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 BMP3P12645 472 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 ANKRD65E5RJM6 399 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 FTCDO95954 541 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CAPN2P17655 700 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 EHHADHQ08426 723 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 NCAPHQ15003 741 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 ANKRD40Q6AI12 368 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CCDC25Q86WR0 208 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 FAM133AQ8N9E0 248 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 SECISBP2LQ93073 1101 aaKnown RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 COA1Q9GZY4 146 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 MYO1AQ9UBC5 1043 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CAMKK2Q96RR4 588 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 DDX4Q9NQI0 724 aaKnown RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CCPG1Q9ULG6 757 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 PACSIN2Q9UNF0 486 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-203ENST00000376619 SALL1Q9NSC2 1324 aa12.32□□□□□ -0.44
HDAC6-203ENST00000376619 CEP104O60308 925 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 NPR1P16066 1061 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 DNM2P50570 870 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 RAD9BQ6WBX8 426 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms