RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 GRAMD1CQ8IYS0 662 aa16.8■□□□□ 0.28
CCHCR1-201ENST00000376266 GLIS2Q9BZE0 524 aaPredicted RBP16.8■□□□□ 0.28
CCHCR1-201ENST00000376266 ROBO3Q96MS0 1386 aa16.8■□□□□ 0.28
CCHCR1-201ENST00000376266 GOLGA6CA6NDK9 693 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 B4E1Z4 1266 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 GOLGA6DP0CG33 693 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 SETQ01105 290 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 AMPD2Q01433 879 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 TRDNQ13061 729 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 FILIP1LQ4L180 1135 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 NT5DC1Q5TFE4 455 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 RALYLQ86SE5 291 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 TMTC1Q8IUR5 882 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 BCAS4Q8TDM0 211 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 RABEP2Q9H5N1 569 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 GOLGA6AQ9NYA3 693 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 SIPA1L1O43166 1804 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 ERCC5P28715 1186 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 SARSP49591 514 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 EHD4Q9H223 541 aa16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 RNF41Q9H4P4 317 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-201ENST00000376266 FGRP09769 529 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 ARHGAP25P42331 645 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 TRIML1Q8N9V2 468 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 MYCNP04198 464 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 STX17P56962 302 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 TRIM29Q14134 588 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 APTXQ7Z2E3 356 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 LDHDQ86WU2 507 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 SUFUQ9UMX1 484 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 PPP2R3BQ9Y5P8 575 aa16.78■□□□□ 0.28
CCHCR1-201ENST00000376266 RANBP6O60518 1105 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 ZMYND10O75800 440 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 SHMT1P34896 483 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 PBX1P40424 430 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 ANTXR2P58335 489 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 PPFIA1Q13136 1202 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 SLF1Q9BQI6 1058 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 CAPS2Q9BXY5 557 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 GUCA1BQ9UMX6 200 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 MYH8P13535 1937 aa16.77■□□□□ 0.28
CCHCR1-201ENST00000376266 GYPCP04921 128 aa16.77■□□□□ 0.27
CCHCR1-201ENST00000376266 YY1P25490 414 aa16.77■□□□□ 0.27
CCHCR1-201ENST00000376266 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.27
CCHCR1-201ENST00000376266 SPATA1Q5VX52 437 aa16.77■□□□□ 0.27
CCHCR1-201ENST00000376266 PHKBQ93100 1093 aa16.77■□□□□ 0.27
CCHCR1-201ENST00000376266 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.27
CCHCR1-201ENST00000376266 CDKL5O76039 1030 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 ERVK-24P63145 666 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 MMS19Q96T76 1030 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 KRT23Q9C075 422 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 AGPSO00116 658 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 TRAF5O00463 557 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 ENC1O14682 589 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 KIF1CO43896 1103 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 ORC4O43929 436 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 RXRAP19793 462 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 RASA1P20936 1047 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 METAP2P50579 478 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 CPLX2Q6PUV4 134 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 EP400NLQ6ZTU2 488 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
CCHCR1-201ENST00000376266 GOLGA6BA6NDN3 693 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 PCP11498 1178 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 GNGT1P63211 74 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 PRKG1Q13976 671 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 CYB5R4Q7L1T6 521 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 TRAPPC11Q7Z392 1133 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 GSPT2Q8IYD1 628 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 ZNF444Q8N0Y2 327 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 SELENOOQ9BVL4 669 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 CAPN7Q9Y6W3 813 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 TARSL2A2RTX5 802 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 H0YHG0 523 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 GRIN1Q05586 938 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 RRP1BQ14684 758 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 ESR2Q92731 530 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 CDCA5Q96FF9 252 aa16.75■□□□□ 0.27
CCHCR1-201ENST00000376266 CAPZA3Q96KX2 299 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms