RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 MCM6Q14566 821 aa21.08■□□□□ 0.96
PPP1R3F-202ENST00000376188 TMEM119Q4V9L6 283 aa21.08■□□□□ 0.96
PPP1R3F-202ENST00000376188 SH3BP5LQ7L8J4 393 aa21.08■□□□□ 0.96
PPP1R3F-202ENST00000376188 KIAA0895Q8NCT3 520 aa21.08■□□□□ 0.96
PPP1R3F-202ENST00000376188 TUBGCP2Q9BSJ2 902 aa21.08■□□□□ 0.96
PPP1R3F-202ENST00000376188 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 FAM196BA6NMK8 535 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 SLURP2P0DP57 97 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 ERCC6LQ2NKX8 1250 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 ANKRD40Q6AI12 368 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 CC2D2BQ6DHV5 1058 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 ATRNL1Q5VV63 1379 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 MYMKA6NI61 221 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 PES1O00541 588 aaKnown RBP21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 KIF5CO60282 957 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 PRKCSHP14314 528 aaPredicted RBP21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 ERVK-24P63145 666 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 MAP3K9P80192 1104 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 CDC37Q16543 378 aaPredicted RBP21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 PCDHA1Q9Y5I3 950 aa21.07■□□□□ 0.96
PPP1R3F-202ENST00000376188 RAD21O60216 631 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 MARCH6O60337 910 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 ENTPD3O75355 529 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 GMCL1P1Q8NEA9 526 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 SUPT20HQ8NEM7 779 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 UBXN4Q92575 508 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 HAS1Q92839 578 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 CNOT6LQ96LI5 555 aaKnown RBP21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 LZTFL1Q9NQ48 299 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 LUC7L2Q9Y383 392 aaKnown RBP21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 EFCAB8A8MWE9 144 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 SEPT2Q15019 361 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 MCTP2Q6DN12 878 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 CENPPQ6IPU0 288 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 RETREG2Q8NC44 543 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 LRRN4CLQ8ND94 238 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 OR8K1Q8NGG5 319 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 NUP58Q9BVL2 599 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 MRFAP1Q9Y605 127 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 KDM3AQ9Y4C1 1321 aa21.06■□□□□ 0.96
PPP1R3F-202ENST00000376188 RNF225M0QZC1 329 aaPredicted RBP21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 SLC26A4O43511 780 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP11P51784 963 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 AP3B2Q13367 1082 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 AOC3Q16853 763 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 ABCB5Q2M3G0 1257 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 FBXO38Q6PIJ6 1188 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 DNAJC7Q99615 494 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 NT5C3AQ9H0P0 336 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 ZNF219Q9P2Y4 722 aaPredicted RBP21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 CAPN11Q9UMQ6 739 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 PCDHA12Q9UN75 941 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 TTC26A0AVF1 554 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 TADA3O75528 432 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 CHRNA5P30532 468 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 PSMD2Q13200 908 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 TSR1Q2NL82 804 aaKnown RBP21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 ARHGAP29Q52LW3 1261 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 GUF1Q8N442 669 aaKnown RBP21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 C7orf43Q8WVR3 580 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 CARD6Q9BX69 1037 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 SLC39A2Q9NP94 309 aa21.05■□□□□ 0.96
PPP1R3F-202ENST00000376188 B4DLN1 442 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 MOXD1Q6UVY6 613 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 GMCL1Q96IK5 515 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 NUDT12Q9BQG2 462 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 ANO3Q9BYT9 981 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 MTIF2P46199 727 aaKnown RBP21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 HYIQ5T013 277 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 SIAH1Q8IUQ4 282 aa21.04■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L15C9J2P7 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L13C9JLJ4 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L11C9JVI0 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L18D6R9N7 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L22D6RA61 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L17D6RBQ6 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L19D6RCP7 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L20D6RJB6 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 F5H6K3 240 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 FGFR1OPO95684 399 aaKnown RBP21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 KLRC3Q07444 240 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L24Q0WX57 530 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 SHROOM1Q2M3G4 852 aaPredicted RBP21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 USP17L6PQ6QN14 398 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 DYMQ7RTS9 669 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 AMNQ9BXJ7 453 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 SEMA6BQ9H3T3 888 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 MYO1AQ9UBC5 1043 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 CYP3A7-CYP3A51PA0A087WV96 503 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 H2AFXP16104 143 aaPredicted RBP21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 CYP3A7P24462 503 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 TBC1D8BQ0IIM8 1120 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 FOXR2Q6PJQ5 311 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 ACRBPQ8NEB7 543 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 DDX12PQ92771 950 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 IQCDQ96DY2 449 aa21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 NOC4LQ9BVI4 516 aaKnown RBP21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 TDRD3Q9H7E2 651 aaKnown RBP21.03■□□□□ 0.96
PPP1R3F-202ENST00000376188 ABCB11O95342 1321 aa21.02■□□□□ 0.96
PPP1R3F-202ENST00000376188 GDF11O95390 407 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms