RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 YY1AP1Q9H869 796 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 NOP53Q9NZM5 478 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 FAM8A1Q9UBU6 413 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 ADCY2Q08462 1091 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 ITKQ08881 620 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 FAM133BQ5BKY9 247 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 SLC39A2Q9NP94 309 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 SRRM1Q8IYB3 904 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 UHMK1Q8TAS1 419 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 SNX1Q13596 522 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 EMBQ6PCB8 327 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 CARMIL3Q8ND23 1372 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 SEC31AO94979 1220 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 ATG16L1Q676U5 607 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 ENC1O14682 589 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 TRPA1O75762 1119 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 DLATP10515 647 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 ABCD1P33897 745 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 PANX2Q96RD6 677 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 MMS19Q96T76 1030 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 IL1RL1Q01638 556 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 CDR2Q01850 454 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 MESDQ14696 234 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 PPP2R5AQ15172 486 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 TMED2Q15363 201 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 NAA35Q5VZE5 725 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 SUCLG2Q96I99 432 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 IPO5O00410 1097 aaKnown RBP10.67□□□□□ -0.7
SPEN-201ENST00000375759 ZAP70P43403 619 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 USP19O94966 1318 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 SHANK2Q9UPX8 1470 aa10.67□□□□□ -0.7
SPEN-201ENST00000375759 FAM26FQ5R3K3 315 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 FBXO18Q8NFZ0 1043 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ADPGKQ9BRR6 497 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ARHGEF10O15013 1369 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 RNF123Q5XPI4 1314 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 MAN1A2O60476 641 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ARMCX5Q6P1M9 558 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 CARD14Q9BXL6 1004 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ARHGEF16Q5VV41 709 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 METTL13Q8N6R0 699 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 CPXCR1Q8N123 301 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 GSTA4O15217 222 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 MAPK4P31152 587 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 CLCN6P51797 869 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 RBL2Q08999 1139 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 SKA2Q8WVK7 121 aaPredicted RBP10.66□□□□□ -0.7
SPEN-201ENST00000375759 PLTPP55058 493 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 NEK9Q8TD19 979 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ACTN1P12814 892 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 CASP8Q14790 479 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 MMS22LQ6ZRQ5 1243 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 GLG1Q92896 1179 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 POLR3CQ9BUI4 534 aaPredicted RBP10.66□□□□□ -0.7
SPEN-201ENST00000375759 ZMYND12Q9H0C1 365 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 NBPF10Q6P3W6 841 aaKnown RBP10.66□□□□□ -0.7
SPEN-201ENST00000375759 EXOC1LA0A1B0GW35 172 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 C2orf54Q08AI8 447 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 TFCP2L1Q9NZI6 479 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 ABCC4O15439 1325 aa10.66□□□□□ -0.7
SPEN-201ENST00000375759 GNPATO15228 680 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 IQCB1Q15051 598 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 CEP19Q96LK0 163 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 MAN2A1Q16706 1144 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 TCP11X2Q5H9J9 407 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 MID2Q9UJV3 735 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 RASGRF2O14827 1237 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 ESRRAP11474 423 aaPredicted RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 SLC39A14Q15043 492 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 MRPL47Q9HD33 250 aaKnown RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 PARD6BQ9BYG5 372 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 CLIC4Q9Y696 253 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 MAP3K19Q56UN5 1328 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 HSPD1P10809 573 aaKnown RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 SYF2O95926 243 aaKnown RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 MT-ND3P03897 115 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 GSPT1P15170 499 aaKnown RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 RFX6Q8HWS3 928 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 IFNL3Q8IZI9 196 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 NRBP1Q9UHY1 535 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 SCRN1Q12765 414 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 ZYXQ15942 572 aaKnown RBP10.65□□□□□ -0.7
SPEN-201ENST00000375759 DCLK2Q8N568 766 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 TTC1Q99614 292 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 RWDD2AQ9UIY3 292 aa10.65□□□□□ -0.7
SPEN-201ENST00000375759 AFPP02771 609 aaKnown RBP10.65□□□□□ -0.71
SPEN-201ENST00000375759 GAP43P17677 238 aa10.65□□□□□ -0.71
SPEN-201ENST00000375759 HIBCHQ6NVY1 386 aaPredicted RBP10.65□□□□□ -0.71
SPEN-201ENST00000375759 KSR1Q8IVT5 923 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms