RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
HLA-DOA-202ENST00000374813 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 PRKAB2O43741 272 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 AMHP03971 560 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 BMP3P12645 472 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 AVPR2P30518 371 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 STAT2P52630 851 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 HTRA4P83105 476 aaPredicted RBP11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 RBL2Q08999 1139 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 SIGLEC14Q08ET2 396 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 SMAD4Q13485 552 aaKnown RBP11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 RPAINQ86UA6 219 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 GVINP1Q7Z2Y8 2422 aa11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
HLA-DOA-202ENST00000374813 MICAL3Q7RTP6 2002 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 DMXL1Q9Y485 3027 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 CYP2D7A0A087X1C5 515 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 NBNO60934 754 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 CKBP12277 381 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 ALAS1P13196 640 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 TMEM192Q8IY95 271 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 GMCL1P1Q8NEA9 526 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 MPHOSPH6Q99547 160 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 FSD1Q9BTV5 496 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 ZNF287Q9HBT7 754 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 ALG13Q9NP73 1137 aaKnown RBP11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 ZNF292O60281 2723 aa11.18□□□□□ -0.62
HLA-DOA-202ENST00000374813 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 H0Y858 1186 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 BCAR3O75815 825 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 MBD4O95243 580 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 TTLL1O95922 423 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 IKQ13123 557 aaPredicted RBP11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 PPP2R5BQ15173 497 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 CLUL1Q15846 466 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 FBXO11Q86XK2 927 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 ERC1Q8IUD2 1116 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 MYOCDQ8IZQ8 938 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 YME1L1Q96TA2 773 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 TLR9Q9NR96 1032 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 ARPP21Q9UBL0 812 aaPredicted RBP11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 CD207Q9UJ71 328 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
HLA-DOA-202ENST00000374813 PRR23AA6NEV1 266 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 B4DLN1 442 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 GOLIM4O00461 696 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 ANP32CO43423 234 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 PLA2G6O60733 806 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 LGR5O75473 907 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 RB1P06400 928 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 RASA1P20936 1047 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 MRPL12P52815 198 aaKnown RBP11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 NSMFQ6X4W1 530 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 ASCL5Q7RTU5 278 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 AACSQ86V21 672 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 ZNF444Q8N0Y2 327 aaPredicted RBP11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 ISY1Q9ULR0 285 aaKnown RBP11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 SLC4A4Q9Y6R1 1079 aa11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 DDX49Q9Y6V7 483 aaKnown RBP11.16□□□□□ -0.62
HLA-DOA-202ENST00000374813 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 LOC730098B7Z3J9 87 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 EYA4O95677 639 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 TXNP10599 105 aaKnown RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 NBL1P41271 181 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 ALDH5A1P51649 535 aaPredicted RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 DLX2Q07687 328 aaPredicted RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 PPP1R13LQ8WUF5 828 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 TOP1MTQ969P6 601 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 PPP2R3CQ969Q6 453 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 CTAGE1Q96RT6 745 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 C11orf84Q9BUA3 381 aaPredicted RBP11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 RWDD3Q9Y3V2 267 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 FRYLO94915 3013 aa11.15□□□□□ -0.62
HLA-DOA-202ENST00000374813 EP300Q09472 2414 aaPredicted RBP11.15□□□□□ -0.63
HLA-DOA-202ENST00000374813 PLXNA3P51805 1871 aa11.15□□□□□ -0.63
HLA-DOA-202ENST00000374813 ZBED9Q6R2W3 1325 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 IGKV6D-41A0A0C4DH26 115 aa11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
HLA-DOA-202ENST00000374813 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms