RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 ENOX1Q8TC92 643 aaKnown RBP13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 DDX12PQ92771 950 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 AGBL1Q96MI9 1066 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 CHD4Q14839 1912 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 ENC1O14682 589 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 RCAN1P53805 252 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 PSMC6P62333 389 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 TBC1D8BQ0IIM8 1120 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 MYRIPQ8NFW9 859 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 ZKSCAN4Q969J2 545 aaPredicted RBP13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 GSDMAQ96QA5 445 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 FGFBP2Q9BYJ0 223 aa13.35□□□□□ -0.27
TMEM38B-202ENST00000374692 CHMP4BP1P59074 171 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 E2F4Q16254 413 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 CCDC40Q4G0X9 1142 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 GPBP1Q86WP2 473 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 CHP1Q99653 195 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 PPARDQ03181 441 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 LZTS2Q9BRK4 669 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 CARD6Q9BX69 1037 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 CAPZA3Q96KX2 299 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
TMEM38B-202ENST00000374692 PDS5AQ29RF7 1337 aaKnown RBP13.33□□□□□ -0.27
TMEM38B-202ENST00000374692 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 CLIC2O15247 247 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 INPP5BP32019 993 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 EPS15P42566 896 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 TRAPPC10P48553 1259 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 SYCP1Q15431 976 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 ZNF569Q5MCW4 686 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 RSBN1LQ6PCB5 846 aaPredicted RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 ARHGAP27Q6ZUM4 889 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 PDCL2Q8N4E4 241 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 CAMKK2Q96RR4 588 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 WDR24Q96S15 920 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 TRIM9Q9C026 710 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 PRR12Q9ULL5 1215 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 FLOT1O75955 427 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 EIF2AK2P19525 551 aaKnown RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 SPTLC3Q9NUV7 552 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 ABCB11O95342 1321 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 STAT2P52630 851 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 ARHGAP4P98171 946 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 TDRD12Q587J7 1177 aaKnown RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 GPATCH4Q5T3I0 446 aaKnown RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 ZNF658Q5TYW1 1059 aaPredicted RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 SIAH1Q8IUQ4 282 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 ELMO3Q96BJ8 720 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 RAB34Q9BZG1 259 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 AGPAT5Q9NUQ2 364 aa13.33□□□□□ -0.28
TMEM38B-202ENST00000374692 RSPH10B2B2RC85 870 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 RSPH10BP0C881 870 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 GRB10Q13322 594 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 TMEM179Q6ZVK1 233 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 CCDC43Q96MW1 224 aaKnown RBP13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 BHMT2Q9H2M3 363 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 MRPL44Q9H9J2 332 aaKnown RBP13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 POLD1P28340 1107 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.283e-6■■■■■ 28.3
TMEM38B-202ENST00000374692 SPP2Q13103 211 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 TMED8Q6PL24 325 aaPredicted RBP13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 MMTAG2Q9BU76 263 aaKnown RBP13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 TAOK3Q9H2K8 898 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 DEF6Q9H4E7 631 aa13.32□□□□□ -0.28
TMEM38B-202ENST00000374692 WNT10BO00744 389 aa13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 RNASE9P60153 205 aaKnown RBP13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 DHX36Q9H2U1 1008 aaKnown RBP13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 RMND1Q9NWS8 449 aa13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 MYH6P13533 1939 aa13.31□□□□□ -0.28
TMEM38B-202ENST00000374692 FAM86B1E9PN63 330 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms