RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 EHD4Q9H223 541 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 TBC1D7Q9P0N9 293 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 MYH4Q9Y623 1939 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 PSMD14O00487 310 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 GYPCP04921 128 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 STAT3P40763 770 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 GNG11P61952 73 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 LRRC41Q15345 812 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 KRT79Q5XKE5 535 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 SV2BQ7L1I2 683 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 REXO1L1PQ8IX06 675 aa20.46■□□□□ 0.87
RXRB-202ENST00000374685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.46■□□□□ 0.873e-8■■□□□ 13.7
RXRB-202ENST00000374685 CCDC47Q96A33 483 aaKnown RBP20.45■□□□□ 0.86
RXRB-202ENST00000374685 TSPYL1Q9H0U9 437 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 TMOD2Q9NZR1 351 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 A0A1W2PRG0 241 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 MYMKA6NI61 221 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 NKRFO15226 690 aaKnown RBP eCLIP20.45■□□□□ 0.86
RXRB-202ENST00000374685 CAPN2P17655 700 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 ECM1Q16610 540 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 CC2D2BQ6DHV5 1058 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 TMEM179Q6ZVK1 233 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 IRF2BP1Q8IU81 584 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 KRT222Q8N1A0 295 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 PCMTD1Q96MG8 357 aaPredicted RBP20.45■□□□□ 0.86
RXRB-202ENST00000374685 PNMA5Q96PV4 448 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 MAGEC2Q9UBF1 373 aaPredicted RBP20.45■□□□□ 0.86
RXRB-202ENST00000374685 FOCADQ5VW36 1801 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 SLC30A10Q6XR72 485 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 PAXIP1Q6ZW49 1069 aaPredicted RBP20.45■□□□□ 0.86
RXRB-202ENST00000374685 FCHSD1Q86WN1 690 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 TTLL6Q8N841 843 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 LARP4BQ92615 738 aaKnown RBP20.45■□□□□ 0.86
RXRB-202ENST00000374685 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 BLOC1S4Q9NUP1 217 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 PCDHA12Q9UN75 941 aa20.45■□□□□ 0.86
RXRB-202ENST00000374685 B4DLN1 442 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 hCG_1984214I3L0E3 225 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 ZSCAN12O43309 604 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 STX10O60499 249 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 RHOBTB3O94955 611 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 TPM1P09493 284 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 ETF1P62495 437 aaKnown RBP20.44■□□□□ 0.86
RXRB-202ENST00000374685 ANKRD40Q6AI12 368 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 RAD9BQ6WBX8 426 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 ZNF713Q8N859 430 aaPredicted RBP20.44■□□□□ 0.86
RXRB-202ENST00000374685 GIMAP8Q8ND71 665 aaPredicted RBP20.44■□□□□ 0.86
RXRB-202ENST00000374685 GLIS3Q8NEA6 775 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 ACER1Q8TDN7 264 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 FAM53CQ9NYF3 392 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 FANCGO15287 622 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 DPEP1P16444 411 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 DLGAP5Q15398 846 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 PRR16Q569H4 304 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 OGFOD1Q8N543 542 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 HAS1Q92839 578 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 RAB34Q9BZG1 259 aa20.44■□□□□ 0.86
RXRB-202ENST00000374685 RGS17Q9UGC6 210 aaPredicted RBP20.44■□□□□ 0.86
RXRB-202ENST00000374685 MRPL44Q9H9J2 332 aaKnown RBP20.43■□□□□ 0.86
RXRB-202ENST00000374685 POLD4Q9HCU8 107 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 MFAP3LO75121 409 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 AMPD3Q01432 767 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 CT47A1Q5JQC4 288 aaPredicted RBP20.43■□□□□ 0.86
RXRB-202ENST00000374685 WDR24Q96S15 920 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 P2RX7Q99572 595 aaKnown RBP20.43■□□□□ 0.86
RXRB-202ENST00000374685 ANO3Q9BYT9 981 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 TMEM39BQ9GZU3 492 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 NYAP2Q9P242 653 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 LIMA1Q9UHB6 759 aaKnown RBP20.43■□□□□ 0.86
RXRB-202ENST00000374685 MYO3BQ8WXR4 1341 aa20.43■□□□□ 0.86
RXRB-202ENST00000374685 H7C1D1 291 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 KLK7P49862 253 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 ELF2Q15723 593 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 CCDC174Q6PII3 467 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 ACRBPQ8NEB7 543 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 KRT9P35527 623 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 MTIF2P46199 727 aaKnown RBP20.42■□□□□ 0.86
RXRB-202ENST00000374685 UBXN2AP68543 259 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 KCNB1Q14721 858 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 TATDN1Q6P1N9 297 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 KIAA0895Q8NCT3 520 aa20.42■□□□□ 0.86
RXRB-202ENST00000374685 E9PMD0 336 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 BMP3P12645 472 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 PBX1P40424 430 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 SPAG1Q07617 926 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 KIAA1024Q9UPX6 916 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 NPHP3-ACAD11A0A0J9YXS1 232 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 KIF2AO00139 706 aaPredicted RBP20.41■□□□□ 0.86
RXRB-202ENST00000374685 CCP110O43303 1012 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 HDLBPQ00341 1268 aaKnown RBP20.41■□□□□ 0.86
RXRB-202ENST00000374685 TTI2Q6NXR4 508 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 TRIM65Q6PJ69 517 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 FBXO11Q86XK2 927 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 DDX12PQ92771 950 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 P2RX5Q93086 422 aa20.41■□□□□ 0.86
RXRB-202ENST00000374685 POTEB3A0JP26 581 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 POTECB2RU33 542 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 MEIS1O00470 390 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms