RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 USP27XA6NNY8 438 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 RPS12P25398 132 aaKnown RBP21.99■■□□□ 1.11
HDAC1-201ENST00000373548 ARHGAP4P98171 946 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 AMPD3Q01432 767 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 KRT79Q5XKE5 535 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 SPECC1LQ69YQ0 1117 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 MOXD1Q6UVY6 613 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 CDK5RAP3Q96JB5 506 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 GLIS2Q9BZE0 524 aaPredicted RBP21.99■■□□□ 1.11
HDAC1-201ENST00000373548 KCNMB3Q9NPA1 279 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 ADD3Q9UEY8 706 aaKnown RBP21.99■■□□□ 1.11
HDAC1-201ENST00000373548 PCDHA12Q9UN75 941 aa21.99■■□□□ 1.11
HDAC1-201ENST00000373548 MARCH6O60337 910 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 ASIC1P78348 528 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 ZYXQ15942 572 aaKnown RBP21.98■■□□□ 1.11
HDAC1-201ENST00000373548 TMEM119Q4V9L6 283 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 SV2BQ7L1I2 683 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.115e-6■□□□□ 9.5
HDAC1-201ENST00000373548 LTBP3Q9NS15 1303 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 RASSF7Q02833 373 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 MCM6Q14566 821 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 CCDC84Q86UT8 332 aaPredicted RBP21.98■■□□□ 1.11
HDAC1-201ENST00000373548 LARP4BQ92615 738 aaKnown RBP21.98■■□□□ 1.11
HDAC1-201ENST00000373548 TEPSINQ96N21 525 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 KCND1Q9NSA2 647 aa21.98■■□□□ 1.11
HDAC1-201ENST00000373548 TEX33O43247 280 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 FOSP01100 380 aaPredicted RBP21.97■■□□□ 1.11
HDAC1-201ENST00000373548 ASNSP08243 561 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 PRELPP51888 382 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 GOLGA8FQ08AF8 430 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 GOLGA8DPQ0D2H9 430 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 C16orf45Q96MC5 204 aaPredicted RBP21.97■■□□□ 1.11
HDAC1-201ENST00000373548 CTAGE1Q96RT6 745 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 SH2D4AQ9H788 454 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 EXOC1Q9NV70 894 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 TRIM49BA6NDI0 452 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 SPDYE3A6NKU9 549 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 PHF20L1A8MW92 1017 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 SREBF1P36956 1147 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 GMPSP49915 693 aaPredicted RBP21.97■■□□□ 1.11
HDAC1-201ENST00000373548 PMS1P54277 932 aaKnown RBP21.97■■□□□ 1.11
HDAC1-201ENST00000373548 PDE4DQ08499 809 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 ECM1Q16610 540 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 KCNK18Q7Z418 384 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 CCAR2Q8N163 923 aaKnown RBP21.97■■□□□ 1.11
HDAC1-201ENST00000373548 RAD54LQ92698 747 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 CCDC47Q96A33 483 aaKnown RBP21.97■■□□□ 1.11
HDAC1-201ENST00000373548 UIMC1Q96RL1 719 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 TMX1Q9H3N1 280 aa21.97■■□□□ 1.11
HDAC1-201ENST00000373548 MYMKA6NI61 221 aa21.96■■□□□ 1.11
HDAC1-201ENST00000373548 HOXA13P31271 388 aaPredicted RBP21.96■■□□□ 1.11
HDAC1-201ENST00000373548 KCNJ6P48051 423 aa21.96■■□□□ 1.11
HDAC1-201ENST00000373548 CHURC1Q8WUH1 139 aa21.96■■□□□ 1.11
HDAC1-201ENST00000373548 RANBP17Q9H2T7 1088 aaKnown RBP21.96■■□□□ 1.11
HDAC1-201ENST00000373548 LIMA1Q9UHB6 759 aaKnown RBP21.96■■□□□ 1.11
HDAC1-201ENST00000373548 PIK3CDO00329 1044 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 NRDCO43847 1150 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 PLA2G6O60733 806 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 STIM1Q13586 685 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 TNFAIP1Q13829 316 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 KRT31Q15323 416 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 MICALL2Q8IY33 904 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 KIFC2Q96AC6 838 aa21.95■■□□□ 1.11
HDAC1-201ENST00000373548 LRRC10BA6NIK2 292 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 H7C1D1 291 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 PSMA7O14818 248 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 PBX1P40424 430 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 STK4Q13043 487 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 TRAF1Q13077 416 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 E4F1Q66K89 784 aaPredicted RBP21.95■■□□□ 1.1
HDAC1-201ENST00000373548 SAMD7Q7Z3H4 446 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 CCDC112Q8NEF3 446 aa21.95■■□□□ 1.1
HDAC1-201ENST00000373548 ASTN2O75129 1339 aaPredicted RBP21.95■■□□□ 1.1
HDAC1-201ENST00000373548 TPM2P07951 284 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 SPAG1Q07617 926 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 Q4G0T1 1027 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 PRR16Q569H4 304 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 HYIQ5T013 277 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 CCDC174Q6PII3 467 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 ETNPPLQ8TBG4 499 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 LENG9Q96B70 501 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 PRIMPOLQ96LW4 560 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 TRMT1Q9NXH9 659 aaKnown RBP21.94■■□□□ 1.1
HDAC1-201ENST00000373548 KCNJ18B7U540 433 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 FZD9O00144 591 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 FCER1AP12319 257 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 KCNJ12Q14500 433 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 FILIP1LQ4L180 1135 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 TCP11X2Q5H9J9 407 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 FAM160B2Q86V87 743 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 IRF2BP1Q8IU81 584 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 SLFN12Q8IYM2 578 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 DHTKD1Q96HY7 919 aaPredicted RBP21.94■■□□□ 1.1
HDAC1-201ENST00000373548 FBXO28Q9NVF7 368 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 GJA3Q9Y6H8 435 aa21.94■■□□□ 1.1
HDAC1-201ENST00000373548 FAM86B1E9PN63 330 aa21.93■■□□□ 1.1
HDAC1-201ENST00000373548 FAM86B2P0C5J1 330 aa21.93■■□□□ 1.1
HDAC1-201ENST00000373548 CCT6AP40227 531 aaKnown RBP21.93■■□□□ 1.1
HDAC1-201ENST00000373548 TTI2Q6NXR4 508 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms