RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 IDEP14735 1019 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 LARP4BQ92615 738 aaKnown RBP26.62■■□□□ 1.85
CDK9-201ENST00000373264 TTYH3Q9C0H2 523 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 CDC23Q9UJX2 597 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 MYH7BA7E2Y1 1941 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 A0A1W2PQC6 194 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 TRIM21P19474 475 aaKnown RBP26.61■■□□□ 1.85
CDK9-201ENST00000373264 CHMP4BP1P59074 171 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 BMS1Q14692 1282 aaKnown RBP26.61■■□□□ 1.85
CDK9-201ENST00000373264 NOC4LQ9BVI4 516 aaKnown RBP26.61■■□□□ 1.85
CDK9-201ENST00000373264 MAGEF1Q9HAY2 307 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 RIC8AQ9NPQ8 531 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 BRWD3Q6RI45 1802 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 CTAGE9A4FU28 777 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 G3V3G9 751 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 ENC1O14682 589 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 DNM2P50570 870 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 FXR2P51116 673 aaKnown RBP eCLIP26.61■■□□□ 1.85
CDK9-201ENST00000373264 DCAF8Q5TAQ9 597 aa26.61■■□□□ 1.85
CDK9-201ENST00000373264 PCMTD1Q96MG8 357 aaPredicted RBP26.61■■□□□ 1.85
CDK9-201ENST00000373264 MYH4Q9Y623 1939 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 RCCD1A6NED2 376 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 DDTLA6NHG4 134 aaPredicted RBP26.6■■□□□ 1.85
CDK9-201ENST00000373264 EPHB6O15197 1021 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 GPR161Q8N6U8 529 aaKnown RBP26.6■■□□□ 1.85
CDK9-201ENST00000373264 GOLGA1Q92805 767 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 CDK5RAP3Q96JB5 506 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 HDAC6Q9UBN7 1215 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 CC2D1AQ6P1N0 951 aaPredicted RBP26.6■■□□□ 1.85
CDK9-201ENST00000373264 SRGAP1Q7Z6B7 1085 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 TEKT1Q969V4 418 aa26.6■■□□□ 1.85
CDK9-201ENST00000373264 ARGLU1Q9NWB6 273 aaPredicted RBP26.6■■□□□ 1.85
CDK9-201ENST00000373264 CRKP46108 304 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 CLK2P49760 499 aaKnown RBP26.59■■□□□ 1.85
CDK9-201ENST00000373264 DDX25Q9UHL0 483 aaKnown RBP26.59■■□□□ 1.85
CDK9-201ENST00000373264 TBC1D8O95759 1140 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 PLEKP08567 350 aaPredicted RBP26.59■■□□□ 1.85
CDK9-201ENST00000373264 MMP10P09238 476 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 AMPD3Q01432 767 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 NCAPH2Q6IBW4 605 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 CNNM4Q6P4Q7 775 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 DDX12PQ92771 950 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 ZNF622Q969S3 477 aaKnown RBP eCLIP26.59■■□□□ 1.85
CDK9-201ENST00000373264 CCDC47Q96A33 483 aaKnown RBP26.59■■□□□ 1.85
CDK9-201ENST00000373264 FGFBP2Q9BYJ0 223 aa26.59■■□□□ 1.85
CDK9-201ENST00000373264 BICDL2A1A5D9 508 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 RABGGTAQ92696 567 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 RAD54LQ92698 747 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 ANKZF1Q9H8Y5 726 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 DUSP10Q9Y6W6 482 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 NPR1P16066 1061 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 CYP27A1Q02318 531 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 CACNB1Q02641 598 aaPredicted RBP26.58■■□□□ 1.85
CDK9-201ENST00000373264 TMEM266Q2M3C6 531 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 PNKPQ96T60 521 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 NAPGQ99747 312 aaPredicted RBP26.58■■□□□ 1.85
CDK9-201ENST00000373264 LACRTQ9GZZ8 138 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 PSTPIP2Q9H939 334 aa26.58■■□□□ 1.85
CDK9-201ENST00000373264 ZBTB5O15062 677 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 CENPPQ6IPU0 288 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 SH3BP5LQ7L8J4 393 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 CCDC155Q8N6L0 562 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 TBC1D7Q9P0N9 293 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 SWAP70Q9UH65 585 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 hCG_1984214I3L0E3 225 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 EEF2P13639 858 aaKnown RBP26.57■■□□□ 1.84
CDK9-201ENST00000373264 RBM5P52756 815 aaKnown RBP eCLIP26.57■■□□□ 1.84
CDK9-201ENST00000373264 UNC13DQ70J99 1090 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 ZNF713Q8N859 430 aaPredicted RBP26.57■■□□□ 1.84
CDK9-201ENST00000373264 CUL5Q93034 780 aa26.57■■□□□ 1.84
CDK9-201ENST00000373264 P2RX7Q99572 595 aaKnown RBP26.57■■□□□ 1.84
CDK9-201ENST00000373264 COL11A2P13942 1736 aaPredicted RBP26.57■■□□□ 1.84
CDK9-201ENST00000373264 RAD51AP2Q09MP3 1159 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 NOC3LQ8WTT2 800 aaKnown RBP26.56■■□□□ 1.84
CDK9-201ENST00000373264 GTPBP4Q9BZE4 634 aaKnown RBP26.56■■□□□ 1.84
CDK9-201ENST00000373264 SUGT1Q9Y2Z0 365 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 NRXN2Q9P2S2 1712 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 SSBP05455 408 aaKnown RBP eCLIP26.56■■□□□ 1.84
CDK9-201ENST00000373264 HLA-DOAP06340 250 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 QRICH1Q2TAL8 776 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 KRT79Q5XKE5 535 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 TMC4Q7Z404 712 aa26.56■■□□□ 1.84
CDK9-201ENST00000373264 QSER1Q2KHR3 1735 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 NPHP3-ACAD11A0A0J9YXS1 232 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 SRGAP2O75044 1071 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 RHOXF2BP0C7M4 288 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 HHIPL2Q6UWX4 724 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 KRT26Q7Z3Y9 468 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 RHOXF2Q9BQY4 288 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 NHEJ1Q9H9Q4 299 aaPredicted RBP26.55■■□□□ 1.84
CDK9-201ENST00000373264 FAM207AQ9NSI2 230 aaPredicted RBP26.55■■□□□ 1.84
CDK9-201ENST00000373264 FAM198AQ9UFP1 575 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 GDF11O95390 407 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 STAT3P40763 770 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 UTP14CQ5TAP6 766 aaKnown RBP26.55■■□□□ 1.84
CDK9-201ENST00000373264 SIAH1Q8IUQ4 282 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 ZSCAN29Q8IWY8 852 aaPredicted RBP26.55■■□□□ 1.84
CDK9-201ENST00000373264 STK17AQ9UEE5 414 aa26.55■■□□□ 1.84
CDK9-201ENST00000373264 E9PMD0 336 aa26.54■■□□□ 1.84
CDK9-201ENST00000373264 AMPD2Q01433 879 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms