RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PPP2R5AQ15172 486 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 SWT1Q5T5J6 900 aaKnown RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ANKRD40Q6AI12 368 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 MAEAQ7L5Y9 396 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 SGMS1Q86VZ5 419 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC13Q8IYE1 715 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 IFNL2Q8IZJ0 200 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 TRIML1Q8N9V2 468 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 PRPF38AQ8NAV1 312 aaKnown RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 KCNH5Q8NCM2 988 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 CTCFLQ8NI51 663 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ZNF507Q8TCN5 953 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ZNF473Q8WTR7 871 aaKnown RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 GJA10Q969M2 543 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 GSDMAQ96QA5 445 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 OSBPL9Q96SU4 736 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 HAUS4Q9H6D7 363 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 VIPAS39Q9H9C1 493 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 NLRC4Q9NPP4 1024 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 RIPOR2Q9Y4F9 1068 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 UTRNP46939 3433 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 UBR1Q8IWV7 1749 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 LMO7Q8WWI1 1683 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 PHF20L1A8MW92 1017 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ZFYP08048 801 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ATP6V1AP38606 617 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 SLC1A4P43007 532 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 STK4Q13043 487 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 LRRC41Q15345 812 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 NAALADL2Q58DX5 795 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC178Q5BJE1 867 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 GBP6Q6ZN66 633 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 KRT28Q7Z3Y7 464 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 MAATS1Q7Z4T9 603 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 SRBD1Q8N5C6 995 aaKnown RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 ENAHQ8N8S7 591 aaPredicted RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 MDM1Q8TC05 714 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 TMEM87BQ96K49 555 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 CTAGE1Q96RT6 745 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 KRT12Q99456 494 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 DNAJC7Q99615 494 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 DUSP9Q99956 384 aaKnown RBP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 TUBGCP2Q9BSJ2 902 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 PACSIN1Q9BY11 444 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATG4A-204ENST00000372246 SNX12Q9UMY4 172 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 CEP83Q9Y592 693 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 RIC1Q4ADV7 1423 aa6.02□□□□□ -1.45
ATG4A-204ENST00000372246 A0A0G2JS52 829 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 LRRC10BA6NIK2 292 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 LGALS16A8MUM7 142 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MEFVO15553 781 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 KRT86O43790 486 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CYP2D6P10635 497 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 COPB2P35606 906 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 KRT2P35908 639 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 STAT6P42226 847 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CEP85LQ5SZL2 805 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC181Q5TID7 509 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CSGALNACT2Q8N6G5 542 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 UHMK1Q8TAS1 419 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CASKIN2Q8WXE0 1202 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CABS1Q96KC9 395 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CCT8L2Q96SF2 557 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CEP89Q96ST8 783 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 RUFY1Q96T51 708 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 PHF20Q9BVI0 1012 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 AP1M1Q9BXS5 423 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 IFIH1Q9BYX4 1025 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MTFR1LQ9H019 292 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 NEUROG2Q9H2A3 272 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MMRN2Q9H8L6 949 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 SLC40A1Q9NP59 571 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 SLC39A2Q9NP94 309 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 GPR108Q9NPR9 543 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CNOT8Q9UFF9 292 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 DDX20Q9UHI6 824 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 RWDD2AQ9UIY3 292 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 TBC1D2BQ9UPU7 963 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 ITIH6Q6UXX5 1313 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 ERICH2A1L162 156 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 SMIM23A6NLE4 172 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 IRF6O14896 467 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 HSF2BPO75031 334 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 KIAA0754O94854 1291 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 HEXIM1O94992 359 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MTIF2P46199 727 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 NLRP5P59047 1200 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 PPP4CP60510 307 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 FUT2Q10981 343 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 KIF5AQ12840 1032 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MIIPQ5JXC2 388 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 ZNF658Q5TYW1 1059 aaPredicted RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 C8orf74Q6P047 294 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 SMIM5Q71RC9 77 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 RRAGAQ7L523 313 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 ADAT2Q7Z6V5 191 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 DNAJC10Q8IXB1 793 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 ADSSL1Q8N142 457 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 1368 ms