RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 KIF5AQ12840 1032 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 CCDC42Q96M95 316 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 SEMA6BQ9H3T3 888 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 ANO9A1A5B4 782 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 LRRIQ3A6PVS8 624 aaPredicted RBP21.32■■□□□ 1
TMEM53-202ENST00000372237 NKRFO15226 690 aaKnown RBP eCLIP21.32■■□□□ 1
TMEM53-202ENST00000372237 CDK17Q00537 523 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 SPA17Q15506 151 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 UBA5Q9GZZ9 404 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 TMEM260Q9NX78 707 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 LRWD1Q9UFC0 647 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 FAN1Q9Y2M0 1017 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 DUSP10Q9Y6W6 482 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 GPR75-ASB3A0A0A6YYF3 556 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 IDEP14735 1019 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 VAV2P52735 878 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 CALCRLQ16602 461 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 ZSCAN26Q16670 478 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 SLC27A3Q5K4L6 730 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 CENPPQ6IPU0 288 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 CAGE1Q8TC20 777 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 IQCDQ96DY2 449 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 CDK5RAP3Q96JB5 506 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 JADE2Q9NQC1 790 aa21.31■■□□□ 1
TMEM53-202ENST00000372237 GRB10Q13322 594 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 MAP9Q49MG5 647 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 MUM1L1Q5H9M0 696 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 CNBD1Q8NA66 436 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 SECISBP2LQ93073 1101 aaKnown RBP21.3■■□□□ 1
TMEM53-202ENST00000372237 TSGA10Q9BZW7 698 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 CD209Q9NNX6 404 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 STK17AQ9UEE5 414 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 ESYT2A0FGR8 921 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 USP17L5A8MUK1 530 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 PLCG2P16885 1265 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 FAM71BQ8TC56 605 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 LARP4BQ92615 738 aaKnown RBP21.3■■□□□ 1
TMEM53-202ENST00000372237 PURBQ96QR8 312 aaKnown RBP21.3■■□□□ 1
TMEM53-202ENST00000372237 BLOC1S4Q9NUP1 217 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 PLAGL2Q9UPG8 496 aa21.3■■□□□ 1
TMEM53-202ENST00000372237 TMEM266Q2M3C6 531 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 VWA3BQ502W6 1294 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 C15orf52Q6ZUT6 534 aaKnown RBP21.29■■□□□ 1
TMEM53-202ENST00000372237 UNC13DQ70J99 1090 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 DYMQ7RTS9 669 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 MTMR9Q96QG7 549 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 TARSL2A2RTX5 802 aaKnown RBP21.29■■□□□ 1
TMEM53-202ENST00000372237 MYMKA6NI61 221 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 PLEKP08567 350 aaPredicted RBP21.29■■□□□ 1
TMEM53-202ENST00000372237 GYS1P13807 737 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 CCDC96Q2M329 555 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 NDST4Q9H3R1 872 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 RIOX1Q9H6W3 641 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 MED4Q9NPJ6 270 aa21.29■■□□□ 1
TMEM53-202ENST00000372237 PVALEFA0A1B0GWK0 134 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 ZNF185O15231 689 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 USO1O60763 962 aaKnown RBP21.28■■□□□ 1
TMEM53-202ENST00000372237 PHACTR2O75167 634 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 UFL1O94874 794 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 GPSM2P81274 684 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 KRT26Q7Z3Y9 468 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 GOLGA5Q8TBA6 731 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 RAB34Q9BZG1 259 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 FAM207AQ9NSI2 230 aaPredicted RBP21.28■■□□□ 1
TMEM53-202ENST00000372237 FRMPD2Q68DX3 1309 aaPredicted RBP21.28■■□□□ 1
TMEM53-202ENST00000372237 hCG_1984214I3L0E3 225 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 ZNF263O14978 683 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 TNNT3P45378 269 aaPredicted RBP21.28■■□□□ 1
TMEM53-202ENST00000372237 FXR2P51116 673 aaKnown RBP eCLIP21.28■■□□□ 1
TMEM53-202ENST00000372237 C2CD5Q86YS7 1000 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 ZNF713Q8N859 430 aaPredicted RBP21.28■■□□□ 1
TMEM53-202ENST00000372237 IFIH1Q9BYX4 1025 aaKnown RBP21.28■■□□□ 1
TMEM53-202ENST00000372237 VIPAS39Q9H9C1 493 aa21.28■■□□□ 1
TMEM53-202ENST00000372237 FGFR1OPO95684 399 aaKnown RBP21.27■■□□□ 1
TMEM53-202ENST00000372237 PDHBP11177 359 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 HNRNPH3P31942 346 aaKnown RBP21.27■■□□□ 1
TMEM53-202ENST00000372237 PRR5LQ6MZQ0 368 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 TRIM58Q8NG06 486 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 RPGRQ92834 1020 aaKnown RBP21.27■■□□□ 1
TMEM53-202ENST00000372237 COA7Q96BR5 231 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 PNMA5Q96PV4 448 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 DEF6Q9H4E7 631 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 SIK3Q9Y2K2 1263 aa21.27■■□□□ 1
TMEM53-202ENST00000372237 POTEMA6NI47 508 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 SLC37A4O43826 429 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 TDP2O95551 362 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 CAPN2P17655 700 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 ACTN2P35609 894 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 ADCY7P51828 1080 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 RHBDL3P58872 404 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 MAN2A1Q16706 1144 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 MFSD14BQ5SR56 506 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 IQCEQ6IPM2 695 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 PROM2Q8N271 834 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 GUF1Q8N442 669 aaKnown RBP21.27■□□□□ 0.99
TMEM53-202ENST00000372237 MMRN2Q9H8L6 949 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 ARHGAP20Q9P2F6 1191 aa21.27■□□□□ 0.99
TMEM53-202ENST00000372237 EPHB6O15197 1021 aa21.26■□□□□ 0.99
TMEM53-202ENST00000372237 LEKR1Q6ZMV7 388 aa21.26■□□□□ 0.99
TMEM53-202ENST00000372237 CCDC84Q86UT8 332 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms