RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 DHX9Q08211 1270 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 HADHQ16836 314 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 PLD3Q8IV08 490 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 SYT2Q8N9I0 419 aaPredicted RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 B4GALNT2Q8NHY0 566 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 TXKP42681 527 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 ANO5Q75V66 913 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 CCDC103Q8IW40 242 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 MEIS3Q99687 375 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 L3MBTL1Q9Y468 752 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 PLTPP55058 493 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 PRKG1Q13976 671 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 NELFCDQ8IXH7 590 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 METTL14Q9HCE5 456 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 KITP10721 976 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 NUGGCQ68CJ6 796 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 ELAC2Q9BQ52 826 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 MYO18AQ92614 2054 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 RPN1P04843 607 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 CASP8Q14790 479 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 MRPS26Q9BYN8 205 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 CDC23Q9UJX2 597 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 YWHAHQ04917 246 aaPredicted RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 PPHLN1Q8NEY8 458 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 TMEM63CQ9P1W3 806 aa16.57■□□□□ 0.24
GTF3C4-201ENST00000372146 AATFQ9NY61 560 aaKnown RBP eCLIP16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 PNMA6AP0CW24 399 aaPredicted RBP16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 ST13P50502 369 aaKnown RBP16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 HOOK2Q96ED9 719 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 KRT17Q04695 432 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 ZMYND12Q9H0C1 365 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 GID8Q9NWU2 228 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 CDC26Q8NHZ8 85 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 PITPNM3Q9BZ71 974 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 ADNPQ9H2P0 1102 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 SLC9A1P19634 815 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 STK24Q9Y6E0 443 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 MAGOHBQ96A72 148 aaKnown RBP16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
GTF3C4-201ENST00000372146 CCDC142Q17RM4 750 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 NUDCD1Q96RS6 583 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 TAGAPQ8N103 731 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 RFWD2Q8NHY2 731 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 RNF113AO15541 343 aaKnown RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 SPOPLQ6IQ16 392 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 H7C0C1 242 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 CDC25BP30305 580 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 ATP5OP48047 213 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 OMA1Q96E52 524 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 C10orf88Q9H8K7 445 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 SEC24DO94855 1032 aaPredicted RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 ACTN1P12814 892 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 CYP2J2P51589 502 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 NOVA2Q9UNW9 492 aaKnown RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 NOSTRINQ8IVI9 506 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 ACSL3O95573 720 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 SRGAP2BP0DMP2 458 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 GRIN1Q05586 938 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 KLC3Q6P597 504 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 SZRD1Q7Z422 152 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 TESK2Q96S53 571 aa16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 EPN1Q9Y6I3 576 aaPredicted RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
GTF3C4-201ENST00000372146 RNF103-CHMP3A0A140T963 221 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 TNNC2P02585 160 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 WASHC5Q12768 1159 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 TRIM67Q6ZTA4 783 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 RFX8Q6ZV50 586 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 KIF2CQ99661 725 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 SGO2Q562F6 1265 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 MED10Q9BTT4 135 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 PARD6BQ9BYG5 372 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 KIAA1468Q9P260 1216 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 TRIM33Q9UPN9 1127 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 HMGXB3Q12766 1538 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 MT-ND3P03897 115 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 RDH13Q8NBN7 331 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 ANKRD2Q9GZV1 360 aa16.54■□□□□ 0.24
GTF3C4-201ENST00000372146 RNPEPQ9H4A4 650 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms