RNA–Protein interactions for RNA: ENST00000372105.3

LRIT1-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT1, Length 2,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1-201ENST00000372105 SLC44A5Q8NCS7 719 aa17.79■□□□□ 0.44
LRIT1-201ENST00000372105 PURBQ96QR8 312 aaKnown RBP17.79■□□□□ 0.44
LRIT1-201ENST00000372105 SH3GL2Q99962 352 aa17.79■□□□□ 0.44
LRIT1-201ENST00000372105 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
LRIT1-201ENST00000372105 HDAC6Q9UBN7 1215 aa17.79■□□□□ 0.44
LRIT1-201ENST00000372105 SCN9AQ15858 1988 aa17.79■□□□□ 0.44
LRIT1-201ENST00000372105 MYH1P12882 1939 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 ENC1O14682 589 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 PRPF3O43395 683 aaKnown RBP17.78■□□□□ 0.44
LRIT1-201ENST00000372105 EPB41P11171 864 aaKnown RBP17.78■□□□□ 0.44
LRIT1-201ENST00000372105 USP8P40818 1118 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 DACT2Q5SW24 774 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 HHIPL2Q6UWX4 724 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 MICALL1Q8N3F8 863 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 ZNF507Q8TCN5 953 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 OPA1O60313 960 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 NT5C2P49902 561 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 FKBP1AP62942 108 aaKnown RBP17.78■□□□□ 0.44
LRIT1-201ENST00000372105 PICALMQ13492 652 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 WDR59Q6PJI9 974 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
LRIT1-201ENST00000372105 CCDC82Q8N4S0 544 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 RETREG2Q8NC44 543 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 CAPS2Q9BXY5 557 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
LRIT1-201ENST00000372105 SHTN1A0MZ66 631 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 USP17L3A6NCW0 530 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 USP17L4A6NCW7 530 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 EIF3HO15372 352 aaKnown RBP eCLIP17.77■□□□□ 0.44
LRIT1-201ENST00000372105 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
LRIT1-201ENST00000372105 TRAPPC10P48553 1259 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 PKN1Q16512 942 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 USP17L1Q7RTZ2 530 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 KIAA1328Q86T90 577 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 KIAA0825Q8IV33 1275 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 ZNF444Q8N0Y2 327 aaPredicted RBP17.77■□□□□ 0.44
LRIT1-201ENST00000372105 TNFRSF25Q93038 417 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 NUP58Q9BVL2 599 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 PLEKHA4Q9H4M7 779 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 THAP9Q9H5L6 903 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 FAM169AQ9Y6X4 670 aa17.77■□□□□ 0.44
LRIT1-201ENST00000372105 ZNF646O15015 1829 aaPredicted RBP17.77■□□□□ 0.43
LRIT1-201ENST00000372105 CALM1P0DP23 149 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CALM2P0DP24 149 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CALM3P0DP25 149 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 PRLRP16471 622 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CRKP46108 304 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 SKOR1P84550 965 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 TTC38Q5R3I4 469 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 C16orf86Q6ZW13 317 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CCDC91Q7Z6B0 441 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 SPATS2Q86XZ4 545 aaKnown RBP17.76■□□□□ 0.43
LRIT1-201ENST00000372105 IRF2BP1Q8IU81 584 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 RIN2Q8WYP3 895 aaPredicted RBP17.76■□□□□ 0.43
LRIT1-201ENST00000372105 SHISA4Q96DD7 197 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 DRC1Q96MC2 740 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 TSGA10Q9BZW7 698 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
LRIT1-201ENST00000372105 KIF13BQ9NQT8 1826 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 FAM205CA6NFA0 338 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 ANKRD65E5RJM6 399 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 DDAH1O94760 285 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CLSTN1O94985 981 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 IPO7O95373 1038 aaKnown RBP17.76■□□□□ 0.43
LRIT1-201ENST00000372105 RASA1P20936 1047 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CCT5P48643 541 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CDK8P49336 464 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 DNM2P50570 870 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CDK17Q00537 523 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 TROAPQ12815 778 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 CAGE1Q8TC20 777 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
LRIT1-201ENST00000372105 ZNF287Q9HBT7 754 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 IL17RBQ9NRM6 502 aa17.76■□□□□ 0.43
LRIT1-201ENST00000372105 RPN1P04843 607 aaKnown RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 TSPY3P0CV98 308 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 TSPY8P0CW00 308 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 MYBL2P10244 700 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 FUT2Q10981 343 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 EARS2Q5JPH6 523 aaKnown RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 ALS2CLQ60I27 953 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 APOBEC3HQ6NTF7 200 aaKnown RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 CDC42EP5Q6NZY7 148 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 RTKN2Q8IZC4 609 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 ZBTB9Q96C00 473 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 SRGAP2O75044 1071 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 ADSSL1Q8N142 457 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 MTRQ99707 1265 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 ZNHIT6Q9NWK9 470 aaKnown RBP17.75■□□□□ 0.43
LRIT1-201ENST00000372105 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
LRIT1-201ENST00000372105 GRIN2DO15399 1336 aa17.74■□□□□ 0.43
LRIT1-201ENST00000372105 YDJCA8MPS7 323 aa17.74■□□□□ 0.43
LRIT1-201ENST00000372105 TNFRSF8P28908 595 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms