RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 JMJD4Q9H9V9 463 aa19.03■□□□□ 0.64
VEGFA-205ENST00000372067 B4DLN1 442 aa19.03■□□□□ 0.64
VEGFA-205ENST00000372067 FKBP15Q5T1M5 1219 aa19.03■□□□□ 0.64
VEGFA-205ENST00000372067 REXO1L1PQ8IX06 675 aa19.03■□□□□ 0.64
VEGFA-205ENST00000372067 IRX2Q9BZI1 471 aaPredicted RBP19.03■□□□□ 0.64
VEGFA-205ENST00000372067 LUC7L2Q9Y383 392 aaKnown RBP19.03■□□□□ 0.64
VEGFA-205ENST00000372067 TNRC6CQ9HCJ0 1690 aaKnown RBP19.02■□□□□ 0.64
VEGFA-205ENST00000372067 CACNB1Q02641 598 aaPredicted RBP19.02■□□□□ 0.64
VEGFA-205ENST00000372067 GPATCH4Q5T3I0 446 aaKnown RBP19.02■□□□□ 0.64
VEGFA-205ENST00000372067 DAGLBQ8NCG7 672 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 ACRBPQ8NEB7 543 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 NOC4LQ9BVI4 516 aaKnown RBP19.02■□□□□ 0.64
VEGFA-205ENST00000372067 ABCB5Q2M3G0 1257 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 KIAA1328Q86T90 577 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 SPATA20Q8TB22 786 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 AK8Q96MA6 479 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 PI4KBQ9UBF8 816 aa19.02■□□□□ 0.64
VEGFA-205ENST00000372067 ROBO3Q96MS0 1386 aa19.02■□□□□ 0.63
VEGFA-205ENST00000372067 DDTLA6NHG4 134 aaPredicted RBP19.01■□□□□ 0.63
VEGFA-205ENST00000372067 SLC37A4O43826 429 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 SHMT1P34896 483 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 FXR1P51114 621 aaKnown RBP eCLIP19.01■□□□□ 0.63
VEGFA-205ENST00000372067 RBM26Q5T8P6 1007 aaKnown RBP19.01■□□□□ 0.63
VEGFA-205ENST00000372067 CCDC17Q96LX7 622 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 CCSER1Q9C0I3 900 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 PCDHA12Q9UN75 941 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 SCN7AQ01118 1682 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 ENOX2Q16206 610 aaKnown RBP19.01■□□□□ 0.63
VEGFA-205ENST00000372067 APOBEC3HQ6NTF7 200 aaKnown RBP19.01■□□□□ 0.63
VEGFA-205ENST00000372067 BICDL2A1A5D9 508 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 CNNM4Q6P4Q7 775 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 CSRNP1Q96S65 589 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 MMRN2Q9H8L6 949 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 STK32BQ9NY57 414 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 PUF60Q9UHX1 559 aaKnown RBP19.01■□□□□ 0.63
VEGFA-205ENST00000372067 GUCA1BQ9UMX6 200 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 LAMB2P55268 1798 aa19.01■□□□□ 0.63
VEGFA-205ENST00000372067 SPDYE3A6NKU9 549 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 QRICH1Q2TAL8 776 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 LARGE2Q8N3Y3 721 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 CCDC88AQ3V6T2 1871 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 ZBTB5O15062 677 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 MFAP3LO75121 409 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 GH2P01242 217 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 STK4Q13043 487 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 CDC37Q16543 378 aaPredicted RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 TTC31Q49AM3 519 aaPredicted RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 NAALADL2Q58DX5 795 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 NELFCDQ8IXH7 590 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 OGFOD1Q8N543 542 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 LARP4BQ92615 738 aaKnown RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 CNKSR1Q969H4 720 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 ARGLU1Q9NWB6 273 aaPredicted RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 SUGT1Q9Y2Z0 365 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 TAL1P17542 331 aaPredicted RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 PMS1P54277 932 aaKnown RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 PRR16Q569H4 304 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 TRMT1LQ7Z2T5 733 aaKnown RBP19■□□□□ 0.63
VEGFA-205ENST00000372067 DEF6Q9H4E7 631 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 KANSL2Q9H9L4 492 aa19■□□□□ 0.63
VEGFA-205ENST00000372067 ZRANB2O95218 330 aaKnown RBP eCLIP18.99■□□□□ 0.634e-17■■□□□ 11.4
VEGFA-205ENST00000372067 RXRBP28702 533 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 CCDC40Q4G0X9 1142 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 HHIPL2Q6UWX4 724 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 FAM114A1Q8IWE2 563 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 ADSSL1Q8N142 457 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 P2RX5Q93086 422 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 WDR24Q96S15 920 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 TUBGCP2Q9BSJ2 902 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 TRIM9Q9C026 710 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 EPS15P42566 896 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
VEGFA-205ENST00000372067 TSG101Q99816 390 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 SNED1Q8TER0 1413 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 PRPHP41219 470 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 CDKAL1Q5VV42 579 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 NCAPH2Q6IBW4 605 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 RAD9BQ6WBX8 426 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 CNOT6LQ96LI5 555 aaKnown RBP18.99■□□□□ 0.63
VEGFA-205ENST00000372067 UBXN6Q9BZV1 441 aa18.99■□□□□ 0.63
VEGFA-205ENST00000372067 RREB1Q92766 1687 aa18.98■□□□□ 0.63
VEGFA-205ENST00000372067 FOXR1Q6PIV2 292 aa18.98■□□□□ 0.63
VEGFA-205ENST00000372067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.98■□□□□ 0.633e-7■■■■■ 34.2
VEGFA-205ENST00000372067 SEMA3FQ13275 785 aa18.98■□□□□ 0.63
VEGFA-205ENST00000372067 ZNF772Q68DY9 489 aaPredicted RBP18.98■□□□□ 0.63
VEGFA-205ENST00000372067 CCDC174Q6PII3 467 aa18.98■□□□□ 0.63
VEGFA-205ENST00000372067 KIAA1024Q9UPX6 916 aa18.98■□□□□ 0.63
VEGFA-205ENST00000372067 HOXA13P31271 388 aaPredicted RBP18.97■□□□□ 0.63
VEGFA-205ENST00000372067 NAP1L1P55209 391 aaKnown RBP18.97■□□□□ 0.63
VEGFA-205ENST00000372067 DHX36Q9H2U1 1008 aaKnown RBP18.97■□□□□ 0.63
VEGFA-205ENST00000372067 MRPL44Q9H9J2 332 aaKnown RBP18.97■□□□□ 0.63
VEGFA-205ENST00000372067 SCAF8Q9UPN6 1271 aaKnown RBP18.97■□□□□ 0.63
VEGFA-205ENST00000372067 SH3BP1Q9Y3L3 701 aa18.97■□□□□ 0.63
VEGFA-205ENST00000372067 A0A1B0GUL6 1792 aa18.97■□□□□ 0.63
VEGFA-205ENST00000372067 GYPCP04921 128 aa18.97■□□□□ 0.63
VEGFA-205ENST00000372067 CYP26C1Q6V0L0 522 aa18.97■□□□□ 0.63
VEGFA-205ENST00000372067 PANX2Q96RD6 677 aa18.97■□□□□ 0.63
VEGFA-205ENST00000372067 F5H6K3 240 aa18.97■□□□□ 0.63
VEGFA-205ENST00000372067 TUBB4AP04350 444 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms