RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CCT6AP40227 531 aaKnown RBP22.25■■□□□ 1.15
LHX3-202ENST00000371748 PMS1P54277 932 aaKnown RBP22.25■■□□□ 1.15
LHX3-202ENST00000371748 KIAA1755Q5JYT7 1200 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 MIGA2Q7L4E1 593 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 FBXO11Q86XK2 927 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 CREBRFQ8IUR6 639 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 KIF18AQ8NI77 898 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 SNX29Q8TEQ0 813 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 CDK5RAP3Q96JB5 506 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 CTAGE1Q96RT6 745 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 C7orf25Q9BPX7 421 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 SMCHD1A6NHR9 2005 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 MARCH6O60337 910 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 PDIA5Q14554 519 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 KRT31Q15323 416 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 TC2NQ8N9U0 490 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 AGBL3Q8NEM8 1001 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 P2RX7Q99572 595 aaKnown RBP22.25■■□□□ 1.15
LHX3-202ENST00000371748 VPS33BQ9H267 617 aa22.25■■□□□ 1.15
LHX3-202ENST00000371748 PDE4DQ08499 809 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 MCM6Q14566 821 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 TMEM139Q8IV31 216 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 ARHGEF10LQ9HCE6 1279 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 ZBTB21Q9ULJ3 1066 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 SHTN1A0MZ66 631 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 GCFC2P16383 781 aaKnown RBP22.24■■□□□ 1.15
LHX3-202ENST00000371748 KCNJ6P48051 423 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 FILIP1LQ4L180 1135 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 PPP1R13BQ96KQ4 1090 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 EXOC1Q9NV70 894 aa22.24■■□□□ 1.15
LHX3-202ENST00000371748 SCAF8Q9UPN6 1271 aaKnown RBP22.24■■□□□ 1.15
LHX3-202ENST00000371748 AMPD3Q01432 767 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 NBPF9Q3BBW0 867 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 KRT79Q5XKE5 535 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 BTNL9Q6UXG8 535 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 SV2BQ7L1I2 683 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 LIMA1Q9UHB6 759 aaKnown RBP22.23■■□□□ 1.15
LHX3-202ENST00000371748 PRR12Q9ULL5 1215 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 KCNJ18B7U540 433 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 KCNJ12Q14500 433 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 LARP4BQ92615 738 aaKnown RBP22.23■■□□□ 1.15
LHX3-202ENST00000371748 VPS16Q9H269 839 aa22.23■■□□□ 1.15
LHX3-202ENST00000371748 PSDA5PKW4 1024 aaPredicted RBP22.22■■□□□ 1.15
LHX3-202ENST00000371748 FCER1AP12319 257 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 PBX1P40424 430 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 STK4Q13043 487 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 STIM1Q13586 685 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 TCP11X2Q5H9J9 407 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 CCDC47Q96A33 483 aaKnown RBP22.22■■□□□ 1.15
LHX3-202ENST00000371748 TAB2Q9NYJ8 693 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 STK17AQ9UEE5 414 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 PCDHA12Q9UN75 941 aa22.22■■□□□ 1.15
LHX3-202ENST00000371748 PSMA7O14818 248 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 TGFB2P61812 414 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 ECM1Q16610 540 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 DALRD3Q5D0E6 543 aaKnown RBP22.21■■□□□ 1.15
LHX3-202ENST00000371748 FAM83BQ5T0W9 1011 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 KCNK18Q7Z418 384 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 MTMR14Q8NCE2 650 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 HPS3Q969F9 1004 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
LHX3-202ENST00000371748 TMX2Q9Y320 296 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 MYMKA6NI61 221 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 H7C1D1 291 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 WNT10BO00744 389 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 N4BP3O15049 544 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 AP3B2Q13367 1082 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 ZYXQ15942 572 aaKnown RBP22.21■■□□□ 1.15
LHX3-202ENST00000371748 BAG1Q99933 345 aaPredicted RBP22.21■■□□□ 1.15
LHX3-202ENST00000371748 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.21■■□□□ 1.15
LHX3-202ENST00000371748 V9GYY5 206 aaPredicted RBP22.21■■□□□ 1.15
LHX3-202ENST00000371748 FER1L6Q2WGJ9 1857 aa22.21■■□□□ 1.15
LHX3-202ENST00000371748 USP11P51784 963 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 STAT2P52630 851 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 COPB1P53618 953 aaKnown RBP22.2■■□□□ 1.15
LHX3-202ENST00000371748 SPAG1Q07617 926 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 FKBP1CQ5VVH2 108 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 CIAPIN1Q6FI81 312 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 DYMQ7RTS9 669 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 IRF2BP1Q8IU81 584 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 ZNF397Q8NF99 534 aaPredicted RBP22.2■■□□□ 1.15
LHX3-202ENST00000371748 RAD54LQ92698 747 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 TRIM47Q96LD4 638 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 NAP1L4Q99733 375 aaKnown RBP22.2■■□□□ 1.15
LHX3-202ENST00000371748 TAOK3Q9H2K8 898 aa22.2■■□□□ 1.15
LHX3-202ENST00000371748 LRRC10BA6NIK2 292 aa22.2■■□□□ 1.14
LHX3-202ENST00000371748 OPLAHO14841 1288 aa22.2■■□□□ 1.14
LHX3-202ENST00000371748 SEMA3FQ13275 785 aa22.2■■□□□ 1.14
LHX3-202ENST00000371748 CPLX3Q8WVH0 158 aa22.2■■□□□ 1.14
LHX3-202ENST00000371748 ERO1AQ96HE7 468 aa22.2■■□□□ 1.14
LHX3-202ENST00000371748 SYNPO2Q9UMS6 1093 aa22.2■■□□□ 1.14
LHX3-202ENST00000371748 HOXA13P31271 388 aaPredicted RBP22.19■■□□□ 1.14
LHX3-202ENST00000371748 ARHGAP4P98171 946 aa22.19■■□□□ 1.14
LHX3-202ENST00000371748 RBL2Q08999 1139 aa22.19■■□□□ 1.14
LHX3-202ENST00000371748 TMEM119Q4V9L6 283 aa22.19■■□□□ 1.14
LHX3-202ENST00000371748 FAM83AQ86UY5 434 aa22.19■■□□□ 1.14
LHX3-202ENST00000371748 ANKRD20A12PQ8NF67 263 aa22.19■■□□□ 1.14
LHX3-202ENST00000371748 ZBED3Q96IU2 234 aaPredicted RBP22.19■■□□□ 1.14
LHX3-202ENST00000371748 GOPCQ9HD26 462 aa22.19■■□□□ 1.14
LHX3-202ENST00000371748 GABPB1Q06547 395 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms