RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 EIF4A3P38919 411 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 IL17AQ16552 155 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ANKRD20A2Q5SQ80 823 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ANKRD20A1Q5TYW2 823 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ANKRD20A3Q5VUR7 823 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 C2CD5Q86YS7 1000 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 PHC3Q8NDX5 983 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 UBLCP1Q8WVY7 318 aaPredicted RBP10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 TSGA10Q9BZW7 698 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 GOLPH3Q9H4A6 298 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 HOMER3Q9NSC5 361 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 ZFATQ9P243 1243 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 PNMA2Q9UL42 364 aa10.4□□□□□ -0.74
HMGCLL1-204ENST00000370852 MYH6P13533 1939 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 NUTM2BA6NNL0 878 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 NUTM2EB1AL46 878 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 IGF2BP3O00425 579 aaKnown RBP eCLIP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 UBOX5O94941 541 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 FMNL1O95466 1100 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 HSPA9P38646 679 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 PAFAH1B1P43034 410 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 ZAP70P43403 619 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 GFPT1Q06210 699 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 TMEM67Q5HYA8 995 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 LRRC34Q8IZ02 419 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 MREGQ8N565 214 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 B4GALNT2Q8NHY0 566 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 CCDC42Q96M95 316 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 SYT15Q9BQS2 421 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 AATFQ9NY61 560 aaKnown RBP eCLIP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 FBXL5Q9UKA1 691 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 PNMA3Q9UL41 463 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 MAP3K15Q6ZN16 1313 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 A0A087WZG4 1122 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 CTNND1O60716 968 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 CDKL5O76039 1030 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 ARID4AP29374 1257 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 SCNN1BP51168 640 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 ITIH3Q06033 890 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 ANO7Q6IWH7 933 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 ZNF662Q6ZS27 426 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 TSC22D3Q99576 134 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 PLCB1Q9NQ66 1216 aa10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-204ENST00000370852 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 GOLGA6L10A6NI86 522 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 AHCYL1O43865 530 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 RNF8O76064 485 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 RARAP10276 462 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 GHRP10912 638 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 NQO1P15559 274 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ITGA6P23229 1130 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 SLC1A4P43007 532 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 KIF11P52732 1056 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 NCALDP61601 193 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 SPA17Q15506 151 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 RNF220Q5VTB9 566 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 PDXDC2PQ6P474 469 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 CRELD2Q6UXH1 353 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 RPUSD2Q8IZ73 545 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 CCDC197Q8NCU1 140 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 CNKSR1Q969H4 720 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 PCMTD2Q9NV79 361 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 CD2APQ9Y5K6 639 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 PDS5AQ29RF7 1337 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 MYH7BA7E2Y1 1941 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 FAM170AA1A519 330 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 SMIM23A6NLE4 172 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 RPN1P04843 607 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 NEFHP12036 1026 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 TCP1P17987 556 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 PRPHP41219 470 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ZNF268Q14587 947 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 TAF11Q15544 211 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 NGDNQ8NEJ9 315 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 TBC1D5Q92609 795 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 CHMP6Q96FZ7 201 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ZNF317Q96PQ6 595 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 XPO6Q96QU8 1125 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 TUBGCP2Q9BSJ2 902 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 AP1M1Q9BXS5 423 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 DDX21Q9NR30 783 aaKnown RBP eCLIP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 FAM207AQ9NSI2 230 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ZNHIT6Q9NWK9 470 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ADAM22Q9P0K1 906 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 ZSWIM5Q9P217 1185 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 C2CD2Q9Y426 696 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
HMGCLL1-204ENST00000370852 SMAPO00193 183 aa10.37□□□□□ -0.75
HMGCLL1-204ENST00000370852 RNMTO43148 476 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-204ENST00000370852 PALMO75781 387 aa10.37□□□□□ -0.75
HMGCLL1-204ENST00000370852 DDX58O95786 925 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-204ENST00000370852 SRGNP10124 158 aa10.37□□□□□ -0.75
HMGCLL1-204ENST00000370852 CHN1P15882 459 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms