RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 RHOXF2Q9BQY4 288 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 DESI2Q9BSY9 194 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 GLT8D2Q9H1C3 349 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 ARHGEF10LQ9HCE6 1279 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 PRPHP41219 470 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 MNAT1P51948 309 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 GSDMDP57764 484 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 LONRF2Q1L5Z9 754 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 CUL5Q93034 780 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 MTMR8Q96EF0 704 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 SYNPO2Q9UMS6 1093 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 FER1L6Q2WGJ9 1857 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 IKBKBO14920 756 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 GUCY2CP25092 1073 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 TNNI2P48788 182 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 PPP2R3AQ06190 1150 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 IL17AQ16552 155 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 NT5DC1Q5TFE4 455 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 GMCL1Q96IK5 515 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 HINFPQ9BQA5 517 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 A0A087X0B3 334 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 AFMP43652 599 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 PAGE5Q96GU1 130 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 MYOZ2Q9NPC6 264 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 MAN1B1Q9UKM7 699 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 CNTNAP1P78357 1384 aa11.18□□□□□ -0.62
PRPF38B-203ENST00000370025 NFKBIEO00221 500 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 NDUFB10O96000 172 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 CDC25BP30305 580 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 SARSP49591 514 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 LIG3P49916 1009 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 KLHL10Q6JEL2 608 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 GRAMD1CQ8IYS0 662 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 MLKLQ8NB16 471 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 RASSF8Q8NHQ8 419 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 TMEM60Q9H2L4 133 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 TMEM260Q9NX78 707 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 WNT10BO00744 389 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 TBC1D12O60347 775 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 OR52Z1P0C646 297 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 BMP3P12645 472 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 UBA7P41226 1012 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 FAM193AP78312 1265 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 QRICH1Q2TAL8 776 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 PSTPIP2Q9H939 334 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 PPP1R11O60927 126 aaPredicted RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 PPARDQ03181 441 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 RRP1BQ14684 758 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 CDC37Q16543 378 aaPredicted RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 SH3RF1Q7Z6J0 888 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 CPLX3Q8WVH0 158 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 ZBED3Q96IU2 234 aaPredicted RBP11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 LZTFL1Q9NQ48 299 aa11.17□□□□□ -0.62
PRPF38B-203ENST00000370025 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 JAG1P78504 1218 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 MYL5Q02045 173 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 NBPF9Q3BBW0 867 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 AK8Q96MA6 479 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 FUT8Q9BYC5 575 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 KCNG1Q9UIX4 513 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 EFCAB8A8MWE9 144 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 MORC3Q14149 939 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 STAT6P42226 847 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 PSEN1P49768 467 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 SYDE2Q5VT97 1194 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 RRAGBQ5VZM2 374 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 SPATA20Q8TB22 786 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 NUP88Q99567 741 aaPredicted RBP11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 CCSER1Q9C0I3 900 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 ZBTB21Q9ULJ3 1066 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
PRPF38B-203ENST00000370025 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 MAGEA9P43362 315 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 HSP90B2PQ58FF3 399 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 DPF2Q92785 391 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 SGIP1Q9BQI5 828 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 AMNQ9BXJ7 453 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 CDC25AP30304 524 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 ZNF280AP59817 542 aaPredicted RBP11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 NCAPHQ15003 741 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 UBE2SQ16763 222 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 EXOC4Q96A65 974 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 SH2D4AQ9H788 454 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 YY1AP1Q9H869 796 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 TMX2Q9Y320 296 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 A0A1W2PRG0 241 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 DPYDQ12882 1025 aa11.15□□□□□ -0.62
PRPF38B-203ENST00000370025 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms