RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 GANCQ8TET4 914 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 LMCD1Q9NZU5 365 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 LLGL1Q15334 1064 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
PDCD11-201ENST00000369797 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 GARSP41250 739 aaKnown RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 CLIC2O15247 247 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 MARK3P27448 753 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 PDE1BQ01064 536 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 TACO1Q9BSH4 297 aaKnown RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 FANCLQ9NW38 375 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 ATP10AO60312 1499 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 BAG2O95816 211 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 ACTN1P12814 892 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 OAS2P29728 719 aaKnown RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 CCND2P30279 289 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 MMEL1Q495T6 779 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 GPATCH4Q5T3I0 446 aaKnown RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 ZNF772Q68DY9 489 aaPredicted RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 POLIQ9UNA4 740 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 POC1B-GALNT4F8VUJ3 575 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 ASPRV1Q53RT3 343 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 SSH3Q8TE77 659 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 COA7Q96BR5 231 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 MYO1FO00160 1098 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 LTKP29376 864 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 CDKL2Q92772 493 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 RASSF4Q9H2L5 321 aa12.3□□□□□ -0.44
PDCD11-201ENST00000369797 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.3□□□□□ -0.44
PDCD11-201ENST00000369797 LRRN2O75325 713 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 NR2F2P24468 414 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 LONP1P36776 959 aaKnown RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 GDAP1Q8TB36 358 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 PIGSQ96S52 555 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 JPH2Q9BR39 696 aaPredicted RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 RIPOR2Q9Y4F9 1068 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 FMNL1O95466 1100 aaPredicted RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 BMP3P12645 472 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 ATP1A2P50993 1020 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 SNAP25P60880 206 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 RASSF7Q02833 373 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 PROSER3Q2NL68 480 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 SLC10A4Q96EP9 437 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 CNOT6LQ96LI5 555 aaKnown RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 BAIAP2L1Q9UHR4 511 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 DYNLT1P63172 113 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 EHHADHQ08426 723 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 PDE1CQ14123 709 aaPredicted RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 TTC30BQ8N4P2 665 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 RNF10Q8N5U6 811 aaKnown RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 SLITRK6Q9H5Y7 841 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 BCAP29Q9UHQ4 241 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 ADCY9O60503 1353 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 GPC4O75487 556 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 NDUFA8P51970 172 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 STAT2P52630 851 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 IQCB1Q15051 598 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 CCDC93Q567U6 631 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 EXOC8Q8IYI6 725 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 LARP4BQ92615 738 aaKnown RBP12.29□□□□□ -0.44
PDCD11-201ENST00000369797 KLHL14Q9P2G3 628 aa12.29□□□□□ -0.44
PDCD11-201ENST00000369797 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
PDCD11-201ENST00000369797 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
PDCD11-201ENST00000369797 ZNF449Q6P9G9 518 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 DNAAF3Q8N9W5 541 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 LMBRD1Q9NUN5 540 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 ELF1P32519 619 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
PDCD11-201ENST00000369797 SNX1Q13596 522 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 SRGAP2CP0DJJ0 459 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 CD58P19256 250 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 CMA1P23946 247 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 BPIFB4P59827 614 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 DBN1Q16643 649 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 CCDC38Q502W7 563 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 ACCSQ96QU6 501 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 FAM49AQ9H0Q0 323 aaPredicted RBP12.28□□□□□ -0.44
PDCD11-201ENST00000369797 KANSL2Q9H9L4 492 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 LRRC4Q9HBW1 653 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 HOMER3Q9NSC5 361 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 TYW1Q9NV66 732 aaKnown RBP12.28□□□□□ -0.44
PDCD11-201ENST00000369797 TLR7Q9NYK1 1049 aaKnown RBP12.28□□□□□ -0.44
PDCD11-201ENST00000369797 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
PDCD11-201ENST00000369797 SRGAP2BP0DMP2 458 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms