RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SNX14Q9Y5W7 946 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 ELP1O95163 1332 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 MAGEA10P43363 369 aaPredicted RBP23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 GNAQP50148 359 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 CDK7P50613 346 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 GNASQ5JWF2 1037 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 NFXL1Q6ZNB6 911 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 ANKRD33Q7Z3H0 272 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 FANCBQ8NB91 859 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 WDR11Q9BZH6 1224 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 BRPF3Q9ULD4 1205 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 SLC12A7Q9Y666 1083 aa23.81■■□□□ 1.4
SMNDC1-201ENST00000369592 RXRAP19793 462 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 TLE2Q04725 743 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 PDE4DQ08499 809 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 CCDC62Q6P9F0 684 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 APOA5Q6Q788 366 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 FBXL16Q8N461 479 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 TCEANC2Q96MN5 208 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 RMDN3Q96TC7 470 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 ATP11BQ9Y2G3 1177 aa23.8■■□□□ 1.4
SMNDC1-201ENST00000369592 B4DLN1 442 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 DYNC1LI2O43237 492 aaPredicted RBP23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 REC8O95072 547 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 CFBP00751 764 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 HMGB1P09429 215 aaKnown RBP23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 MRPL12P52815 198 aaKnown RBP23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 BEX3Q00994 111 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 FSCN1Q16658 493 aaKnown RBP23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 TMTC3Q6ZXV5 915 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 SLC43A3Q8NBI5 491 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 TOX2Q96NM4 488 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 MPHOSPH6Q99547 160 aaKnown RBP23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 STARD7Q9NQZ5 370 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 PDLIM7Q9NR12 457 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 PXMP2Q9NR77 195 aa23.79■■□□□ 1.4
SMNDC1-201ENST00000369592 ARIH2O95376 493 aa23.78■■□□□ 1.4
SMNDC1-201ENST00000369592 FUT2Q10981 343 aa23.78■■□□□ 1.4
SMNDC1-201ENST00000369592 SCFD2Q8WU76 684 aa23.78■■□□□ 1.4
SMNDC1-201ENST00000369592 AGXT2Q9BYV1 514 aa23.78■■□□□ 1.4
SMNDC1-201ENST00000369592 NKRFO15226 690 aaKnown RBP eCLIP23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 NOL8Q76FK4 1167 aaKnown RBP23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 SH3RF1Q7Z6J0 888 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 CMTR1Q8N1G2 835 aaKnown RBP23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 RRP36Q96EU6 259 aaKnown RBP23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 GLT1D1Q96MS3 346 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 PDCD2LQ9BRP1 358 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 USP26Q9BXU7 913 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 AP5M1Q9H0R1 490 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 FAM217BQ9NTX9 383 aaPredicted RBP23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 SCN10AQ9Y5Y9 1956 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 FRMPD4Q14CM0 1322 aa23.77■■□□□ 1.4
SMNDC1-201ENST00000369592 TRIM43BA6NCK2 446 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 NR3C2P08235 984 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 CPA1P15085 419 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 HOXA13P31271 388 aaPredicted RBP23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 RCAN1P53805 252 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 STXBP2Q15833 593 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 RAB11FIP4Q86YS3 637 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 TRIM43Q96BQ3 446 aaPredicted RBP23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 GRIN2DO15399 1336 aa23.76■■□□□ 1.39
SMNDC1-201ENST00000369592 GCOM1H8Y6P7 765 aaPredicted RBP23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 KIAA0355O15063 1070 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 EIF3JO75822 258 aaKnown RBP23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 CABYRO75952 493 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 RGS20O76081 388 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 POLR2MP0CAP2 368 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 EIF2AK2P19525 551 aaKnown RBP23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 FAAP100Q0VG06 881 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 ARHGEF16Q5VV41 709 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 CXCL17Q6UXB2 119 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 VSIG10LQ86VR7 867 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 MICU3Q86XE3 530 aa23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 JAKMIP1Q96N16 626 aaKnown RBP23.75■■□□□ 1.39
SMNDC1-201ENST00000369592 A0A0U1RQG5 324 aaPredicted RBP23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 A6NJR5 290 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 ARVCFO00192 962 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 PIK3CDO00329 1044 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 PPP2R5BQ15173 497 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 DEFB123Q8N688 67 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 IL31RAQ8NI17 732 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 PIBF1Q8WXW3 757 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 COPS5Q92905 334 aa23.74■■□□□ 1.39
SMNDC1-201ENST00000369592 MEIS2O14770 477 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 ZBTB43O43298 467 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 CLTBP09497 229 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 TXNP10599 105 aaKnown RBP23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 ITGB8P26012 769 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 TTLL4Q14679 1199 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 PGM5Q15124 567 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 RBM28Q9NW13 759 aaKnown RBP23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 CNTNAP5Q8WYK1 1306 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 NID2Q14112 1375 aa23.73■■□□□ 1.39
SMNDC1-201ENST00000369592 MYH7BA7E2Y1 1941 aa23.72■■□□□ 1.39
SMNDC1-201ENST00000369592 RPS6KB1P23443 525 aa23.72■■□□□ 1.39
SMNDC1-201ENST00000369592 EVCP57679 992 aa23.72■■□□□ 1.39
SMNDC1-201ENST00000369592 MDM2Q00987 491 aaPredicted RBP23.72■■□□□ 1.39
SMNDC1-201ENST00000369592 FAM126BQ8IXS8 530 aa23.72■■□□□ 1.39
SMNDC1-201ENST00000369592 DDX41Q9UJV9 622 aaKnown RBP23.72■■□□□ 1.39
SMNDC1-201ENST00000369592 TBX21Q9UL17 535 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms