RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 KRT13P13646 458 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 DESP17661 470 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 PDCP20941 246 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 RAD52P43351 418 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 SKOR1P84550 965 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 FOXO4P98177 505 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 TRIM28Q13263 835 aaKnown RBP11.13□□□□□ -0.63
SCNM1-202ENST00000368905 RASA2Q15283 850 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 DDX12PQ92771 950 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 PHOX2BQ99453 314 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 KRT82Q9NSB4 513 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 GTF2IRD1Q9UHL9 959 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 PLCH1Q4KWH8 1693 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 SYNDIG1LA6NDD5 238 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 STX6O43752 255 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 A1BGP04217 495 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
SCNM1-202ENST00000368905 TYRP1P17643 537 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 NASPP49321 788 aaPredicted RBP11.13□□□□□ -0.63
SCNM1-202ENST00000368905 DAB2P98082 770 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 CCDC173Q0VFZ6 552 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 METTL24Q5JXM2 366 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 TTLL7Q6ZT98 887 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 BICD1Q96G01 975 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 TBATAQ96M53 351 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 ALPK1Q96QP1 1244 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 STRBPQ96SI9 672 aaKnown RBP11.13□□□□□ -0.63
SCNM1-202ENST00000368905 CAPS2Q9BXY5 557 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 PSD3Q9NYI0 1048 aa11.13□□□□□ -0.63
SCNM1-202ENST00000368905 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
SCNM1-202ENST00000368905 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L21D6R901 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 C21orf2O43822 256 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 MYBL2P10244 700 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 KRT20P35900 424 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 ATP6V1E1P36543 226 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 MXI1P50539 228 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 KIF11P52732 1056 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 IRX1P78414 480 aaPredicted RBP11.12□□□□□ -0.63
SCNM1-202ENST00000368905 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 TCIRG1Q13488 830 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 TNIP1Q15025 636 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 SPDYCQ5MJ68 293 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 ABRAXAS1Q6UWZ7 409 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
SCNM1-202ENST00000368905 SLC44A2Q8IWA5 706 aaPredicted RBP11.12□□□□□ -0.63
SCNM1-202ENST00000368905 NUP133Q8WUM0 1156 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 RBM18Q96H35 190 aaKnown RBP11.12□□□□□ -0.63
SCNM1-202ENST00000368905 NOSIPQ9Y314 301 aaKnown RBP11.12□□□□□ -0.63
SCNM1-202ENST00000368905 TTLL3Q9Y4R7 772 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 TRIM17Q9Y577 477 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 SHANK3Q9BYB0 1731 aa11.12□□□□□ -0.63
SCNM1-202ENST00000368905 AKR1B15C9JRZ8 316 aaPredicted RBP11.11□□□□□ -0.63
SCNM1-202ENST00000368905 J3KRW8 73 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 EYA2O00167 538 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 NEMFO60524 1076 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 LDHBP07195 334 aaKnown RBP11.11□□□□□ -0.63
SCNM1-202ENST00000368905 PMLP29590 882 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 MCMDC2Q4G0Z9 681 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TAB3Q8N5C8 712 aaPredicted RBP11.11□□□□□ -0.63
SCNM1-202ENST00000368905 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 KIAA1524Q8TCG1 905 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TIFAQ96CG3 184 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 ISCA1Q9BUE6 129 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TRIM55Q9BYV6 548 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 NEUROD4Q9HD90 331 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 SPATA7Q9P0W8 599 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 LUC7L2Q9Y383 392 aaKnown RBP11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TBKBP1A7MCY6 615 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 KLHL41O60662 606 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TAF5LO75529 589 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 GNAT2P19087 354 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 LRRC74AQ0VAA2 488 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
SCNM1-202ENST00000368905 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TCEAL8Q8IYN2 117 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 DBNDD2Q9BQY9 259 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 CDH19Q9H159 772 aa11.11□□□□□ -0.63
SCNM1-202ENST00000368905 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms