RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SLC38A10Q9HBR0 1119 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 NRBP1Q9UHY1 535 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 RPSAP08865 295 aaKnown RBP19.8■□□□□ 0.76
SNX27-202ENST00000368841 KIF11P52732 1056 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 SMAD1Q15797 465 aaKnown RBP19.8■□□□□ 0.76
SNX27-202ENST00000368841 FAM160B1Q5W0V3 765 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 PRAMEF22A3QJZ6 481 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 ATP5JP18859 108 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 CDC25AP30304 524 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 DDIT3P35638 169 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 BAG6P46379 1132 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 NSFP46459 744 aaKnown RBP19.8■□□□□ 0.76
SNX27-202ENST00000368841 ATP10BO94823 1461 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 MED23Q9ULK4 1368 aa19.8■□□□□ 0.76
SNX27-202ENST00000368841 RAD17O75943 681 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 ANKRD36BP1Q96IX9 119 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 BCL2L12Q9HB09 334 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 PCDHA7Q9UN72 937 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 XAB2Q9HCS7 855 aaKnown RBP19.79■□□□□ 0.76
SNX27-202ENST00000368841 ZNF277Q9NRM2 450 aaPredicted RBP19.79■□□□□ 0.76
SNX27-202ENST00000368841 SLCO1A2P46721 670 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 ADALQ6DHV7 355 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 TFAMQ00059 246 aaKnown RBP19.79■□□□□ 0.76
SNX27-202ENST00000368841 CDO1Q16878 200 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 EXOC3L4Q17RC7 722 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 SNX25Q9H3E2 840 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 SEC31BQ9NQW1 1179 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 IRX4P78413 519 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 FTOQ9C0B1 505 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNX27-202ENST00000368841 GOLGA8IPA6NC78 632 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 GOLGA8JA6NMD2 632 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 MOCS3O95396 460 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 ARHGAP25P42331 645 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 ERFEQ4G0M1 354 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 LRRC8CQ8TDW0 803 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 HVCN1Q96D96 273 aa19.79■□□□□ 0.76
SNX27-202ENST00000368841 CDCA7Q9BWT1 371 aaPredicted RBP19.79■□□□□ 0.76
SNX27-202ENST00000368841 CASP14P31944 242 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 CYP4F22Q6NT55 531 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 HSPH1Q92598 858 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 MRPS25P82663 173 aaKnown RBP19.78■□□□□ 0.76
SNX27-202ENST00000368841 MTERF2Q49AM1 385 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 MCF2L2Q86YR7 1114 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 MICAL1Q8TDZ2 1067 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
SNX27-202ENST00000368841 GARSP41250 739 aaKnown RBP19.78■□□□□ 0.76
SNX27-202ENST00000368841 PDE1BQ01064 536 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 RBL2Q08999 1139 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 CAPS2Q9BXY5 557 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 PRDM5Q9NQX1 630 aaPredicted RBP19.78■□□□□ 0.76
SNX27-202ENST00000368841 POLIQ9UNA4 740 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 CYP2D7A0A087X1C5 515 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 STK25O00506 426 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 TNFAIP1Q13829 316 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 SPDYE1Q8NFV5 336 aaPredicted RBP19.78■□□□□ 0.76
SNX27-202ENST00000368841 KMT5AQ9NQR1 393 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 HACD3Q9P035 362 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 AOX1Q06278 1338 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 CHL1O00533 1208 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 PRKAB2O43741 272 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 EAF2Q96CJ1 260 aaPredicted RBP19.78■□□□□ 0.76
SNX27-202ENST00000368841 TESK2Q96S53 571 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 BAG5Q9UL15 447 aa19.78■□□□□ 0.76
SNX27-202ENST00000368841 GANCQ8TET4 914 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 GNGT2O14610 69 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 ATP2B4P23634 1241 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 MORC4Q8TE76 937 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 SYNDIG1LA6NDD5 238 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 HOXA13P31271 388 aaPredicted RBP19.77■□□□□ 0.76
SNX27-202ENST00000368841 CDR2Q01850 454 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 LCA5Q86VQ0 697 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 DYNLL2Q96FJ2 89 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 MTRQ99707 1265 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 NRBP2Q9NSY0 501 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 INHBAP08476 426 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 PROSER3Q2NL68 480 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 FAM133AQ8N9E0 248 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 ZBTB38Q8NAP3 1195 aaPredicted RBP19.77■□□□□ 0.76
SNX27-202ENST00000368841 THOC1Q96FV9 657 aaKnown RBP19.77■□□□□ 0.76
SNX27-202ENST00000368841 PDE11AQ9HCR9 933 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 ZNF804BA4D1E1 1349 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 RNF8O76064 485 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 GFPT2O94808 682 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 CRKLP46109 303 aaKnown RBP19.77■□□□□ 0.76
SNX27-202ENST00000368841 GPT2Q8TD30 523 aa19.77■□□□□ 0.76
SNX27-202ENST00000368841 ZMYM4Q5VZL5 1548 aa19.77■□□□□ 0.75
SNX27-202ENST00000368841 FTCDO95954 541 aa19.77■□□□□ 0.75
SNX27-202ENST00000368841 PEX19P40855 299 aa19.77■□□□□ 0.75
SNX27-202ENST00000368841 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.77■□□□□ 0.75
SNX27-202ENST00000368841 KRT1P04264 644 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 SRGAP2CP0DJJ0 459 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 IQCB1Q15051 598 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 DNAAF3Q8N9W5 541 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 MAPK4P31152 587 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 MOSPD1Q9UJG1 213 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 ANO4Q32M45 955 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 EDC4Q6P2E9 1401 aaKnown RBP19.76■□□□□ 0.75
SNX27-202ENST00000368841 CERS3Q8IU89 383 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 LRRC8AQ8IWT6 810 aa19.76■□□□□ 0.75
SNX27-202ENST00000368841 KCTD6Q8NC69 237 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms