RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 HDLBPQ00341 1268 aaKnown RBP13.8□□□□□ -0.2
LMNA-206ENST00000368300 TATDN1Q6P1N9 297 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 RAD9BQ6WBX8 426 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 NYAP2Q9P242 653 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 PSMD14O00487 310 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 PSMA7O14818 248 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 KCNJ6P48051 423 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 ETF1P62495 437 aaKnown RBP13.79□□□□□ -0.2
LMNA-206ENST00000368300 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
LMNA-206ENST00000368300 KCNB1Q14721 858 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 MTMR8Q96EF0 704 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 FOCADQ5VW36 1801 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 SSBP05455 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
LMNA-206ENST00000368300 TMEM266Q2M3C6 531 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 ANKRD40Q6AI12 368 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 TMEM179Q6ZVK1 233 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 MKL1Q969V6 931 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 LRRC10BA6NIK2 292 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 H7C1D1 291 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 ZYXQ15942 572 aaKnown RBP13.79□□□□□ -0.2
LMNA-206ENST00000368300 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
LMNA-206ENST00000368300 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 SV2BQ7L1I2 683 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 MIGA2Q7L4E1 593 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 CSGALNACT2Q8N6G5 542 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 GLIS3Q8NEA6 775 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
LMNA-206ENST00000368300 MRPL44Q9H9J2 332 aaKnown RBP13.79□□□□□ -0.2
LMNA-206ENST00000368300 VEZTQ9HBM0 779 aa13.79□□□□□ -0.2
LMNA-206ENST00000368300 MFAP3LO75121 409 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
LMNA-206ENST00000368300 STAT3P40763 770 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 STIM1Q13586 685 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 LRRC41Q15345 812 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 CC2D2BQ6DHV5 1058 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 KIAA0895Q8NCT3 520 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 ACER1Q8TDN7 264 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 WDR24Q96S15 920 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■■■ 53.3
LMNA-206ENST00000368300 LZTFL1Q9NQ48 299 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 DPEP1P16444 411 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■■□□□ 13.8
LMNA-206ENST00000368300 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
LMNA-206ENST00000368300 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 CCDC84Q86UT8 332 aaPredicted RBP13.78□□□□□ -0.2
LMNA-206ENST00000368300 TTLL6Q8N841 843 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 ANKRD20A12PQ8NF67 263 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
LMNA-206ENST00000368300 GNG11P61952 73 aa13.77□□□□□ -0.2
LMNA-206ENST00000368300 DCAF4Q8WV16 495 aa13.77□□□□□ -0.2
LMNA-206ENST00000368300 LARP4BQ92615 738 aaKnown RBP13.77□□□□□ -0.2
LMNA-206ENST00000368300 CUEDC2Q9H467 287 aa13.77□□□□□ -0.2
LMNA-206ENST00000368300 B4DLN1 442 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 MEIS2O14770 477 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 ZSCAN12O43309 604 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 URI1O94763 535 aaPredicted RBP13.77□□□□□ -0.21
LMNA-206ENST00000368300 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
LMNA-206ENST00000368300 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
LMNA-206ENST00000368300 MYH8P13535 1937 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 KIF2AO00139 706 aaPredicted RBP13.77□□□□□ -0.21
LMNA-206ENST00000368300 KLK7P49862 253 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 AMPD3Q01432 767 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 SPAG1Q07617 926 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 PDCL2Q8N4E4 241 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 P2RX5Q93086 422 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 PANX2Q96RD6 677 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 ANO3Q9BYT9 981 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 TBC1D7Q9P0N9 293 aa13.77□□□□□ -0.21
LMNA-206ENST00000368300 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 KRT9P35527 623 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 E9PMD0 336 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 ABL1P00519 1130 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 MYL1P05976 194 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 BMP3P12645 472 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 DLGAP5Q15398 846 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 PRR16Q569H4 304 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 RSBN1LQ6PCB5 846 aaPredicted RBP13.76□□□□□ -0.21
LMNA-206ENST00000368300 ACRBPQ8NEB7 543 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 ANKRD7Q92527 254 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 DDX12PQ92771 950 aa13.76□□□□□ -0.21
LMNA-206ENST00000368300 CCDC47Q96A33 483 aaKnown RBP13.76□□□□□ -0.21
LMNA-206ENST00000368300 MAGEC2Q9UBF1 373 aaPredicted RBP13.76□□□□□ -0.21
LMNA-206ENST00000368300 NPHP3-ACAD11A0A0J9YXS1 232 aa13.75□□□□□ -0.21
LMNA-206ENST00000368300 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
LMNA-206ENST00000368300 ERVK-24P63145 666 aa13.75□□□□□ -0.21
LMNA-206ENST00000368300 PDIA5Q14554 519 aa13.75□□□□□ -0.21
LMNA-206ENST00000368300 ELF2Q15723 593 aa13.75□□□□□ -0.21
LMNA-206ENST00000368300 SYDE2Q5VT97 1194 aa13.75□□□□□ -0.21
LMNA-206ENST00000368300 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms