RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 NLRX1Q86UT6 975 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 FBXL13Q8NEE6 735 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 GDAP1Q8TB36 358 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 DHTKD1Q96HY7 919 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ZSCAN10Q96SZ4 725 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ZSWIM6Q9HCJ5 1215 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 OLA1Q9NTK5 396 aaKnown RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 HIBADHP31937 336 aaKnown RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 PARP10Q53GL7 1025 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 FAM133BQ5BKY9 247 aaKnown RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 TRAPPC3LQ5T215 181 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 PBKQ96KB5 322 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 DISC1Q9NRI5 854 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 IFNAR2P48551 515 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 MYLK4Q86YV6 388 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 MED23Q9ULK4 1368 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 CHL1O00533 1208 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 RPN1P04843 607 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 NT5C2P49902 561 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 MTHFSDQ2M296 383 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 PLBD2Q8NHP8 589 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 POLR3CQ9BUI4 534 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 KIFC3Q9BVG8 833 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 NOP53Q9NZM5 478 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 HESX1Q9UBX0 185 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 REREQ9P2R6 1566 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 POC1B-GALNT4F8VUJ3 575 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 H7C0C1 242 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SLC4A1P02730 911 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 H2AFZP0C0S5 128 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ATP5OP48047 213 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 KLC3Q6P597 504 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 H2AFVQ71UI9 128 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 RNF169Q8NCN4 708 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 IRAK4Q9NWZ3 460 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SLC5A4Q9NY91 659 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ARPP21Q9UBL0 812 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SLC13A4Q9UKG4 626 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 MCF2LO15068 1137 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 NPR1P16066 1061 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 OTUD7BQ6GQQ9 843 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ST13P4Q8IZP2 240 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 CPXCR1Q8N123 301 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 GPT2Q8TD30 523 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ATP6V1E2Q96A05 226 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SUCLA2Q9P2R7 463 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 PGRMC1O00264 195 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 CHUKO15111 745 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ABCD1P33897 745 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 PPARAQ07869 468 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 AOC3Q16853 763 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 FBXO31Q5XUX0 539 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TGFBRAP1Q8WUH2 860 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 N4BP2L2Q92802 583 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TRAIPQ9BWF2 469 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 MCF2P10911 925 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SPOPLQ6IQ16 392 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 OTUD7AQ8TE49 926 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SERPINI1Q99574 410 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 JPH2Q9BR39 696 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ZNF532Q9HCE3 1301 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TOM1L1O75674 476 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 HEXIM1O94992 359 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ACTN1P12814 892 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 MAP3K7CLP57077 242 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TADA2BQ86TJ2 420 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 PPM1KQ8N3J5 372 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 UBN1Q9NPG3 1134 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TESPA1A2RU30 521 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TCP11Q8WWU5 503 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 GFM2Q969S9 779 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SMCO2A6NFE2 343 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 RASSF7Q02833 373 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ART3Q13508 389 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 TAF11Q15544 211 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ZC3H18Q86VM9 953 aaKnown RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 RDH13Q8NBN7 331 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 SMCR8Q8TEV9 937 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-208ENST00000367256 DTNBP1Q96EV8 351 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 YY1AP1Q9H869 796 aa7.92□□□□□ -1.14
SYNE1-208ENST00000367256 ABCC12Q96J65 1359 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 ECEL1O95672 775 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 XPAP23025 273 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-208ENST00000367256 TCP10Q12799 353 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 GRAMD4Q6IC98 578 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 ANGPTL8Q6UXH0 198 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 MAP7D3Q8IWC1 876 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-208ENST00000367256 SPTLC3Q9NUV7 552 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 SUFUQ9UMX1 484 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 ZNF148Q9UQR1 794 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-208ENST00000367256 TMEM191BP0C7N4 346 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 KIF17Q9P2E2 1029 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 TPCN1Q9ULQ1 816 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 POLGP54098 1239 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-208ENST00000367256 FLOT2Q14254 428 aa7.91□□□□□ -1.14
SYNE1-208ENST00000367256 ZBTB41Q5SVQ8 909 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms