RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 RHOBTB3O94955 611 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 TCP1P17987 556 aaKnown RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 FECHP22830 423 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 CRKLP46109 303 aaKnown RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 EPHB4P54760 987 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 EHHADHQ08426 723 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 NNTQ13423 1086 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 NELFCDQ8IXH7 590 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 PROCA1Q8NCQ7 364 aaPredicted RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 TRIM9Q9C026 710 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 PPANQ9NQ55 473 aaKnown RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 PCDHA6Q9UN73 950 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 PCDHA8Q9Y5H6 950 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 NUP188Q5SRE5 1749 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 COL22A1Q8NFW1 1626 aaPredicted RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 TMCO5BA8MYB1 307 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 ZNF263O14978 683 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 GUCY1A3Q02108 690 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 CFAP221Q4G0U5 840 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 CREG2Q8IUH2 290 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 TAF4BQ92750 862 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 ANAPC4Q9UJX5 808 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 ROBO1Q9Y6N7 1651 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 KLRF2D3W0D1 207 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 RPS6KA5O75582 802 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 KRT18P05783 430 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 SLC1A4P43007 532 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 CARSP49589 748 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 APBA1Q02410 837 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 NONOQ15233 471 aaKnown RBP eCLIP9.06□□□□□ -0.96
CD46-208ENST00000367042 ERFEQ4G0M1 354 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 TNS2Q63HR2 1409 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 MAPKAPK5Q8IW41 473 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 IFT20Q8IY31 132 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 FAM84BQ96KN1 310 aaPredicted RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 TSG101Q99816 390 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 UBA5Q9GZZ9 404 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 SH2D4AQ9H788 454 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 MYH6P13533 1939 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 COL16A1Q07092 1604 aaPredicted RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 KLRC4O43908 158 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 HIBADHP31937 336 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 EIF6P56537 245 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 POLR2FP61218 127 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 KCNB1Q14721 858 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 VWA3BQ502W6 1294 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 TGFBRAP1Q8WUH2 860 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 CELF1Q92879 486 aaKnown RBP9.06□□□□□ -0.96
CD46-208ENST00000367042 ZIM3Q96PE6 472 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 MYH10P35580 1976 aa9.06□□□□□ -0.96
CD46-208ENST00000367042 EIF3HO15372 352 aaKnown RBP eCLIP9.05□□□□□ -0.96
CD46-208ENST00000367042 TNNI2P48788 182 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 GNAQP50148 359 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 PARP10Q53GL7 1025 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 CEP85LQ5SZL2 805 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 MSL3Q8N5Y2 521 aaKnown RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 TBCKQ8TEA7 893 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 NSUN4Q96CB9 384 aaKnown RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 C6orf50Q9HD87 102 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 LUC7LQ9NQ29 371 aaKnown RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 ANKIB1Q9P2G1 1089 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 ARPP21Q9UBL0 812 aaPredicted RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 AHDC1Q5TGY3 1603 aaPredicted RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 POTEMA6NI47 508 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 E7EVH7 732 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 FGFR1OPO95684 399 aaKnown RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 MEA1Q16626 185 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 TMEM266Q2M3C6 531 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 CCDC84Q86UT8 332 aaPredicted RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 POTEDQ86YR6 584 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 SNX29Q8TEQ0 813 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 KBTBD4Q9NVX7 518 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 NID2Q14112 1375 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 PALMO75781 387 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 KIAA0753Q2KHM9 967 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 SLC9C1Q4G0N8 1177 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 MMS22LQ6ZRQ5 1243 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 C3orf67Q6ZVT6 689 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 NEK8Q86SG6 692 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 DNAAF5Q86Y56 855 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 AENQ8WTP8 325 aaKnown RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 LSM14BQ9BX40 385 aaKnown RBP9.05□□□□□ -0.96
CD46-208ENST00000367042 GOLPH3Q9H4A6 298 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 ADAMTS1Q9UHI8 967 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 MINPP1Q9UNW1 487 aa9.05□□□□□ -0.96
CD46-208ENST00000367042 COL14A1Q05707 1796 aaKnown RBP9.04□□□□□ -0.96
CD46-208ENST00000367042 KCNK3O14649 394 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 BACH1O14867 736 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 RDXP35241 583 aaKnown RBP9.04□□□□□ -0.96
CD46-208ENST00000367042 USP8P40818 1118 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 SEC24CP53992 1094 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 PAK2Q13177 524 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms