RNA–Protein interactions for RNA: ENST00000367004.3

TRAF5-203, Transcript of TNF receptor associated factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF5, Length 1,827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-203ENST00000367004 CCDC170Q8IYT3 715 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 PNKPQ96T60 521 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 RIC8AQ9NPQ8 531 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 ZNHIT6Q9NWK9 470 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 SWAP70Q9UH65 585 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 TRIM21P19474 475 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 OAS2P29728 719 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 ZNF543Q08ER8 600 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 PICALMQ13492 652 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 TMEM119Q4V9L6 283 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 BEND6Q5SZJ8 279 aaPredicted RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 LARP4BQ92615 738 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 RAD54LQ92698 747 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
TRAF5-203ENST00000367004 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 COA1Q9GZY4 146 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 ABCB11O95342 1321 aa14.29□□□□□ -0.12
TRAF5-203ENST00000367004 PNMA6FA0A0J9YX94 578 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 POLRMTO00411 1230 aaKnown RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 TTLL1O95922 423 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 TUBBP07437 444 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 PPP4R3AQ6IN85 833 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 JAKMIP2Q96AA8 810 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 JMJD4Q9H9V9 463 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 SLC39A2Q9NP94 309 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 GPCPD1Q9NPB8 672 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 RGS17Q9UGC6 210 aaPredicted RBP14.28□□□□□ -0.12
TRAF5-203ENST00000367004 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
TRAF5-203ENST00000367004 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.12
TRAF5-203ENST00000367004 ONECUT3O60422 494 aaPredicted RBP14.27□□□□□ -0.12
TRAF5-203ENST00000367004 ERLIN1O75477 346 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 FGFR1OPO95684 399 aaKnown RBP14.27□□□□□ -0.12
TRAF5-203ENST00000367004 EHHADHQ08426 723 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 PAPD7Q5XG87 772 aaKnown RBP14.27□□□□□ -0.12
TRAF5-203ENST00000367004 FOXR2Q6PJQ5 311 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 KIAA1328Q86T90 577 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 ADGRF4Q8IZF3 695 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 EEF2KMTQ96G04 330 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 SIK3Q9Y2K2 1263 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 MYH4Q9Y623 1939 aa14.27□□□□□ -0.12
TRAF5-203ENST00000367004 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 NKRFO15226 690 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAF5-203ENST00000367004 KRT86O43790 486 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 PPP1R11O60927 126 aaPredicted RBP14.27□□□□□ -0.13
TRAF5-203ENST00000367004 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
TRAF5-203ENST00000367004 CYP2C19P33261 490 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 PSMD2Q13200 908 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 VWA3BQ502W6 1294 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 CERS5Q8N5B7 392 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 SNX29Q8TEQ0 813 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 MTMR8Q96EF0 704 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 PCMTD1Q96MG8 357 aaPredicted RBP14.27□□□□□ -0.13
TRAF5-203ENST00000367004 PURBQ96QR8 312 aaKnown RBP14.27□□□□□ -0.13
TRAF5-203ENST00000367004 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 MYH7BA7E2Y1 1941 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 AFF2P51816 1311 aa14.27□□□□□ -0.13
TRAF5-203ENST00000367004 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 POTEMA6NI47 508 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 POLR3GO15318 223 aaPredicted RBP14.26□□□□□ -0.13
TRAF5-203ENST00000367004 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 SHMT1P34896 483 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 EIF6P56537 245 aaKnown RBP14.26□□□□□ -0.13
TRAF5-203ENST00000367004 LRRC63Q05C16 580 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 MAN2A1Q16706 1144 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 KRT79Q5XKE5 535 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 HDXQ7Z353 690 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 NOA1Q8NC60 698 aaKnown RBP14.26□□□□□ -0.13
TRAF5-203ENST00000367004 RHOXF2Q9BQY4 288 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 GBP3Q9H0R5 595 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.26□□□□□ -0.13
TRAF5-203ENST00000367004 SERPINB13Q9UIV8 391 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 TFR2Q9UP52 801 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
TRAF5-203ENST00000367004 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
TRAF5-203ENST00000367004 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
TRAF5-203ENST00000367004 ATP1A1P05023 1023 aaKnown RBP14.25□□□□□ -0.13
TRAF5-203ENST00000367004 TNNI2P48788 182 aa14.25□□□□□ -0.13
TRAF5-203ENST00000367004 VSNL1P62760 191 aa14.25□□□□□ -0.13
TRAF5-203ENST00000367004 UBE2SQ16763 222 aa14.25□□□□□ -0.13
TRAF5-203ENST00000367004 GPATCH4Q5T3I0 446 aaKnown RBP14.25□□□□□ -0.13
TRAF5-203ENST00000367004 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms