RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 CASP14P31944 242 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 TAF12Q16514 161 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 PSMC2P35998 433 aaKnown RBP13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 PTK2Q05397 1052 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 VCX3AQ9NNX9 186 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 K7ENM7 598 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 PFDN6O15212 129 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 MFAP3P55082 362 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGAP4P98171 946 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 TNNC2P02585 160 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 NR2F2P24468 414 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
CDC42BPA-203ENST00000366766 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 M0QZ92 97 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 M0R2C6 588 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 SLC26A4O43511 780 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 IBSPP21815 317 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 LIG4P49917 911 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 SDR42E1Q8WUS8 393 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 MYCLP12524 364 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 RFX1P22670 979 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 TMOD1P28289 359 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGEF16Q5VV41 709 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 ARHGEF2Q92974 986 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 TRIM31Q9BZY9 425 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 CCDC188H7C350 402 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 ATF2P15336 505 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 CCNE1P24864 410 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 ADPGKQ9BRR6 497 aa13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 BSDC1Q9NW68 430 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-203ENST00000366766 CD19P15391 556 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 FAM160B1Q5W0V3 765 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 TUBB6Q9BUF5 446 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 ADCY8P40145 1251 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 BTDP43251 543 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 SLC12A2P55011 1212 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 CASQ2O14958 399 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 ZNF131P52739 623 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 PTPN12Q05209 780 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 TPD52P55327 224 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 NELFCDQ8IXH7 590 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 SERPING1P05155 500 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 GYG1P46976 350 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 IL9RQ01113 521 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 DMTNQ08495 405 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 GEN1Q17RS7 908 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 MYO1FO00160 1098 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 CYP2J2P51589 502 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
CDC42BPA-203ENST00000366766 ANO9A1A5B4 782 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 ZNF189O75820 626 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 USP14P54578 494 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 SURF1Q15526 300 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 CDKL2Q92772 493 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 KCNQ3O43525 872 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 RNF8O76064 485 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 GNGT1P63211 74 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 MYL7Q01449 175 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 KIAA1024Q9UPX6 916 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 PPANQ9NQ55 473 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 TFDP1Q14186 410 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 SLFN13Q68D06 897 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 GOLGA8CPA6NN73 597 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 XPOTO43592 962 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 ADORA1P30542 326 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 POLR2FP61218 127 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
CDC42BPA-203ENST00000366766 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms