RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 NPC1L1Q9UHC9 1359 aa4.08□□□□□ -1.76
RNU1-140P-201ENST00000365040 PGAP2Q9UHJ9 254 aa4.08□□□□□ -1.76
RNU1-140P-201ENST00000365040 NIP7Q9Y221 180 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU1-140P-201ENST00000365040 DLG5Q8TDM6 1919 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 KRBA1A5PL33 1030 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 MEIS3P2A8K0S8 358 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 H7C1D1 291 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 GFRA2O00451 464 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 GSC2O15499 205 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 DHX15O43143 795 aaKnown RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PPIP5K2O43314 1243 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 NEFMP07197 916 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 ATF4P18848 351 aaPredicted RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 RPS12P25398 132 aaKnown RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 HOXA10P31260 410 aaPredicted RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 GATA4P43694 442 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PREPP48147 710 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 HUNKP57058 714 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 FKBP1BP68106 108 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 CPSF6Q16630 551 aaKnown RBP eCLIP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 MTHFSDQ2M296 383 aaKnown RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PARP10Q53GL7 1025 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 TMEM201Q5SNT2 666 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 ZBTB37Q5TC79 503 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 CST9Q5W186 159 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 LRFN4Q6PJG9 635 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PPP1R42Q7Z4L9 355 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 C2orf69Q8N8R5 385 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 C12orf50Q8NA57 414 aaPredicted RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 C2CD4AQ8NCU7 369 aaPredicted RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 ZNF507Q8TCN5 953 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PNISRQ8TF01 805 aaKnown RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 EZH1Q92800 747 aaPredicted RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 JARID2Q92833 1246 aaPredicted RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 UTP4Q969X6 686 aaKnown RBP4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 WNT10AQ9GZT5 417 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PANK3Q9H999 370 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 EHMT1Q9H9B1 1298 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 LGR6Q9HBX8 967 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 UBP1Q9NZI7 540 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 ZNRF3Q9ULT6 936 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 ACTL7BQ9Y614 415 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 PDE4DIPQ5VU43 2346 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 TAF1P21675 1872 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 ECM29Q5VYK3 1845 aa4.07□□□□□ -1.76
RNU1-140P-201ENST00000365040 COL4A5P29400 1685 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 DUOX1Q9NRD9 1551 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 PRAMEF27A3QJZ7 478 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 F6X3S4 739 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 HTATSF1O43719 755 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 IGHA1P01876 353 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 HMOX1P09601 288 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 FGRP09769 529 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 EPS15P42566 896 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 CHRNA4P43681 627 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 CRKP46108 304 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 IREB2P48200 963 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 YARSP54577 528 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 ETF1P62495 437 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 TNNI3KQ59H18 835 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 INTS3Q68E01 1043 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 CIAPIN1Q6FI81 312 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 RGMBQ6NW40 437 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 DYMQ7RTS9 669 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 SLC51AQ86UW1 340 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 CD163Q86VB7 1156 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 HID1Q8IV36 788 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 MRPL41Q8IXM3 137 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 SMYD4Q8IYR2 804 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 AGGF1Q8N302 714 aaeCLIP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 TAB3Q8N5C8 712 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 RBBP8NLQ8NC74 664 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 GIMAP7Q8NHV1 300 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 DPF2Q92785 391 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 DCPSQ96C86 337 aaKnown RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 WDR89Q96FK6 387 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 COX4I2Q96KJ9 171 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 CFAP53Q96M91 514 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 FERD3LQ96RJ6 166 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 POLR3GLQ9BT43 218 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 SSBP4Q9BWG4 385 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 RTFDC1Q9BY42 306 aaPredicted RBP4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 ACSS3Q9H6R3 686 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 ZNF408Q9H9D4 720 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 GMIPQ9P107 970 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 NUDCQ9Y266 331 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 SLC12A7Q9Y666 1083 aa4.06□□□□□ -1.76
RNU1-140P-201ENST00000365040 COL1A1P02452 1464 aaPredicted RBP4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 ABCC12Q96J65 1359 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 MAP3K15Q6ZN16 1313 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 PITPNM2Q9BZ72 1349 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 DCDC2CA8MYV0 355 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 C1QTNF9BB2RNN3 333 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 TRAF5O00463 557 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 BBOX1O75936 387 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 HTR3BO95264 441 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 GDF11O95390 407 aa4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 SSBP05455 408 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNU1-140P-201ENST00000365040 PGRP06401 933 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms