RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TRIM9Q9C026 710 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 MMRN2Q9H8L6 949 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 ARHGAP20Q9P2F6 1191 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
SMC3-201ENST00000361804 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
SMC3-201ENST00000361804 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 GJD4Q96KN9 370 aaPredicted RBP11.8□□□□□ -0.52
SMC3-201ENST00000361804 ESYT3A0FGR9 886 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 RHOBTB3O94955 611 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 P2RX5Q93086 422 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 TBC1D7Q9P0N9 293 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 POTEMA6NI47 508 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 PRPF6O94906 941 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 TRAPPC10P48553 1259 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 NAPAP54920 295 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 STIM1Q13586 685 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 TRIM14Q14142 442 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 FAM71BQ8TC56 605 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 USP21Q9UK80 565 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 FRMPD2Q68DX3 1309 aaPredicted RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 NOVP48745 357 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 PAPD7Q5XG87 772 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMC3-201ENST00000361804 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 RASSF4Q9H2L5 321 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 KLRF2D3W0D1 207 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 KRT86O43790 486 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 KIF5BP33176 963 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 EIF4A3P38919 411 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 DNM2P50570 870 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 RTFDC1Q9BY42 306 aaPredicted RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 NLRC4Q9NPP4 1024 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 PSD3Q9NYI0 1048 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 PACSIN2Q9UNF0 486 aaPredicted RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 EEF1GP26641 437 aaKnown RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 ARID5AQ03989 594 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
SMC3-201ENST00000361804 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 CRACR2AQ9BSW2 395 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 MYO1AQ9UBC5 1043 aa11.79□□□□□ -0.52
SMC3-201ENST00000361804 CALML3P27482 149 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 TRADDQ15628 312 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 MEA1Q16626 185 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 RRAGAQ7L523 313 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 CREG2Q8IUH2 290 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 COA7Q96BR5 231 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 PIGSQ96S52 555 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 POLLQ9UGP5 575 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 GPSM2P81274 684 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 TSEN2Q8NCE0 465 aaKnown RBP11.78□□□□□ -0.52
SMC3-201ENST00000361804 TBCKQ8TEA7 893 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 SECISBP2LQ93073 1101 aaKnown RBP11.78□□□□□ -0.52
SMC3-201ENST00000361804 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
SMC3-201ENST00000361804 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 LRRC53A6NM62 1247 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 TDP2O95551 362 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 RHBDL3P58872 404 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 SH2D3CQ8N5H7 860 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 ZNHIT6Q9NWK9 470 aaKnown RBP11.78□□□□□ -0.52
SMC3-201ENST00000361804 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
SMC3-201ENST00000361804 CCNL1Q9UK58 526 aaPredicted RBP11.78□□□□□ -0.52
SMC3-201ENST00000361804 A0A1W2PQC6 194 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 MYMKA6NI61 221 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 SLC37A4O43826 429 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 CCNE1P24864 410 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.52
SMC3-201ENST00000361804 KIF5AQ12840 1032 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 KCTD16Q68DU8 428 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 CCNI2Q6ZMN8 369 aaPredicted RBP11.77□□□□□ -0.52
SMC3-201ENST00000361804 GOLPH3Q9H4A6 298 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 ATP8A2Q9NTI2 1148 aa11.77□□□□□ -0.52
SMC3-201ENST00000361804 ARPP21Q9UBL0 812 aaPredicted RBP11.77□□□□□ -0.52
SMC3-201ENST00000361804 EIF3CLB5ME19 914 aaKnown RBP11.77□□□□□ -0.53
SMC3-201ENST00000361804 OR52Z1P0C646 297 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 HSPA1LP34931 641 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 RASSF7Q02833 373 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 GRM4Q14833 912 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 NGLY1Q96IV0 654 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 EIF3CQ99613 913 aaKnown RBP11.77□□□□□ -0.53
SMC3-201ENST00000361804 IPO7O95373 1038 aaKnown RBP11.77□□□□□ -0.53
SMC3-201ENST00000361804 KIF11P52732 1056 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 NAP1L1P55209 391 aaKnown RBP11.77□□□□□ -0.53
SMC3-201ENST00000361804 KRT83P78385 493 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 ZBED6P86452 979 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
SMC3-201ENST00000361804 TANGO6Q9C0B7 1094 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms