RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 DENND2CQ68D51 928 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 GPR108Q9NPR9 543 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 STK17AQ9UEE5 414 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 NNMTP40261 264 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 ECE1P42892 770 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 TESK2Q96S53 571 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 C21orf2O43822 256 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 COPB2P35606 906 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 JADE1Q6IE81 842 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 SERTAD1Q9UHV2 236 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 MYL7Q01449 175 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 TTBK2Q6IQ55 1244 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLIP1-203ENST00000361654 STAMQ92783 540 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
CLIP1-203ENST00000361654 FNDC3AQ9Y2H6 1198 aaKnown RBP11.94□□□□□ -0.5
CLIP1-203ENST00000361654 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
CLIP1-203ENST00000361654 TFAMQ00059 246 aaKnown RBP11.94□□□□□ -0.5
CLIP1-203ENST00000361654 ARL13BQ3SXY8 428 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 TTC25Q96NG3 672 aa11.94□□□□□ -0.5
CLIP1-203ENST00000361654 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 B4GALNT4Q76KP1 1039 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 MYO1FO00160 1098 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 H2AFZP0C0S5 128 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 ASPHQ12797 758 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 FAM182BQ5T319 152 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 NXNQ6DKJ4 435 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 H2AFVQ71UI9 128 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 GAS2L3Q86XJ1 694 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 C7orf31Q8N865 590 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 N4BP2L2Q92802 583 aaPredicted RBP11.93□□□□□ -0.5
CLIP1-203ENST00000361654 RPF1Q9H9Y2 349 aaKnown RBP11.93□□□□□ -0.5
CLIP1-203ENST00000361654 KIF24Q5T7B8 1368 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 ATP7AQ04656 1500 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 TRAPPC10P48553 1259 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 KPNA2P52292 529 aaKnown RBP11.93□□□□□ -0.5
CLIP1-203ENST00000361654 PI4K2BQ8TCG2 481 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 TOPORSQ9NS56 1045 aaPredicted RBP11.93□□□□□ -0.5
CLIP1-203ENST00000361654 DENND3A2RUS2 1198 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 GPC4O75487 556 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 ADRA2BP18089 450 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 PHKA1P46020 1223 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 MTERF2Q49AM1 385 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 MIGA2Q7L4E1 593 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 MYLK4Q86YV6 388 aaPredicted RBP11.93□□□□□ -0.5
CLIP1-203ENST00000361654 ARHGEF2Q92974 986 aaKnown RBP11.93□□□□□ -0.5
CLIP1-203ENST00000361654 AFF2P51816 1311 aa11.93□□□□□ -0.5
CLIP1-203ENST00000361654 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 RAET1EQ8TD07 263 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 GJA10Q969M2 543 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 PGBD1Q96JS3 809 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 RUNDC3BQ96NL0 473 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 FAM49AQ9H0Q0 323 aaPredicted RBP11.92□□□□□ -0.5
CLIP1-203ENST00000361654 MAD1L1Q9Y6D9 718 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 MLH3Q9UHC1 1453 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 RNF40O75150 1001 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 UBXN2AP68543 259 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 PHLDB2Q86SQ0 1253 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 RPGRIP1Q96KN7 1286 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 AK8Q96MA6 479 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 OGFRQ9NZT2 677 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 ZNF148Q9UQR1 794 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
CLIP1-203ENST00000361654 PSMC2P35998 433 aaKnown RBP11.92□□□□□ -0.5
CLIP1-203ENST00000361654 BZW2Q9Y6E2 419 aaKnown RBP11.92□□□□□ -0.5
CLIP1-203ENST00000361654 KCNJ18B7U540 433 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 MGEA5O60502 916 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 ALCAMQ13740 583 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 KCNJ12Q14500 433 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 SLFN12LQ6IEE8 588 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 CEP57Q86XR8 500 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 YAF2Q8IY57 180 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 TRIM58Q8NG06 486 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 SAT1P21673 171 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
CLIP1-203ENST00000361654 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
CLIP1-203ENST00000361654 IRX4P78413 519 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms