RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ANO6Q4KMQ2 910 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
CCDC197-201ENST00000359253 NT5DC1Q5TFE4 455 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 MBOAT7Q96N66 472 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 MTMR9Q96QG7 549 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 BPIFA3Q9BQP9 254 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 BEGAINQ9BUH8 593 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 ANO3Q9BYT9 981 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 PPP1R9AQ9ULJ8 1098 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 KCNH4Q9UQ05 1017 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 CTDP1Q9Y5B0 961 aaPredicted RBP15.26■□□□□ 0.03
CCDC197-201ENST00000359253 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
CCDC197-201ENST00000359253 ACTN4O43707 911 aaKnown RBP15.25■□□□□ 0.03
CCDC197-201ENST00000359253 AOC2O75106 756 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 CETPP11597 493 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 VCAM1P19320 739 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 CIITAP33076 1130 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 SREBF1P36956 1147 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 ZNF165P49910 485 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 OAZ1P54368 228 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
CCDC197-201ENST00000359253 GRM1Q13255 1194 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 MTMR2Q13614 643 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 POSTNQ15063 836 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 UBE2SQ16763 222 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 USH1GQ495M9 461 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 SLFN12Q8IYM2 578 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 CRYGNQ8WXF5 182 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 EPSTI1Q96J88 318 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 MS4A4AQ96JQ5 239 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 TMEM60Q9H2L4 133 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
CCDC197-201ENST00000359253 DDX25Q9UHL0 483 aaKnown RBP15.25■□□□□ 0.03
CCDC197-201ENST00000359253 SERTAD1Q9UHV2 236 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L15C9J2P7 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L13C9JLJ4 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L11C9JVI0 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L18D6R9N7 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L22D6RA61 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L17D6RBQ6 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L19D6RCP7 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L20D6RJB6 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 IRF6O14896 467 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L24Q0WX57 530 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 IL17AQ16552 155 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 Q4G0T1 1027 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 USP17L6PQ6QN14 398 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 SH3RF1Q7Z6J0 888 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 IGSF22Q8N9C0 903 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 RNF214Q8ND24 703 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
CCDC197-201ENST00000359253 RPAP3Q9H6T3 665 aaPredicted RBP15.24■□□□□ 0.03
CCDC197-201ENST00000359253 DACH1Q9UI36 760 aa15.24■□□□□ 0.03
CCDC197-201ENST00000359253 FLOT1O75955 427 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 HOXA7P31268 230 aaPredicted RBP15.23■□□□□ 0.03
CCDC197-201ENST00000359253 GJA5P36382 358 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 SARSP49591 514 aaKnown RBP15.23■□□□□ 0.03
CCDC197-201ENST00000359253 ARHGAP4P98171 946 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 COG2Q14746 738 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 E2F4Q16254 413 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 FASTKD5Q7L8L6 764 aaKnown RBP15.23■□□□□ 0.03
CCDC197-201ENST00000359253 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 SPATA20Q8TB22 786 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 CFHR5Q9BXR6 569 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 TANGO6Q9C0B7 1094 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 DISC1Q9NRI5 854 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 SAGE1Q9NXZ1 904 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 HOXC10Q9NYD6 342 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.23■□□□□ 0.03
CCDC197-201ENST00000359253 CCPG1Q9ULG6 757 aa15.23■□□□□ 0.03
CCDC197-201ENST00000359253 SMTNL1A8MU46 457 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 OPLAHO14841 1288 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 MARCH6O60337 910 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 SNAP25P60880 206 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 TKFCQ3LXA3 575 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 CCDC174Q6PII3 467 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
CCDC197-201ENST00000359253 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 PDILTQ8N807 584 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 DHX58Q96C10 678 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 FAM20AQ96MK3 541 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 GSDMAQ96QA5 445 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 ZIC5Q96T25 663 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 CBX8Q9HC52 389 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 FBXO28Q9NVF7 368 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 ADAMTS5Q9UNA0 930 aa15.22■□□□□ 0.03
CCDC197-201ENST00000359253 ZNF536O15090 1300 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms