RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 ZNF75DP51815 510 aa14.17□□□□□ -0.14
NLRC3-202ENST00000359128 ME3Q16798 604 aa14.17□□□□□ -0.14
NLRC3-202ENST00000359128 CASQ2O14958 399 aaPredicted RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 MYSM1Q5VVJ2 828 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 SLITRK6Q9H5Y7 841 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 ERVV-1B6SEH8 477 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 FAM26FQ5R3K3 315 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 SH2D4BQ5SQS7 431 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 GJA10Q969M2 543 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 HDAC11Q96DB2 347 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 FAM8A1Q9UBU6 413 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 ANKARQ7Z5J8 1434 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 WDR64B1ANS9 1081 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 hCG_1984214I3L0E3 225 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 KCNK3O14649 394 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 USP17L8P0C7I0 530 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 RAB44Q7Z6P3 723 aaPredicted RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 ZNF713Q8N859 430 aaPredicted RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 RNF139Q8WU17 664 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 FAM149B1Q96BN6 582 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 SOS2Q07890 1332 aaPredicted RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 TFAMQ00059 246 aaKnown RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 RBBP5Q15291 538 aaKnown RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 CCDC13Q8IYE1 715 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 MAGEF1Q9HAY2 307 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 PFKFB2O60825 505 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 PSMC2P35998 433 aaKnown RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 SYMPKQ92797 1274 aaKnown RBP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 UBN2Q6ZU65 1347 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.16□□□□□ -0.14
NLRC3-202ENST00000359128 LRRC4Q9HBW1 653 aa14.16□□□□□ -0.14
NLRC3-202ENST00000359128 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 ZBTB7AO95365 584 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 CDKL2Q92772 493 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 TM6SF1Q9BZW5 370 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 RPF1Q9H9Y2 349 aaKnown RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 TYW1Q9NV66 732 aaKnown RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 PTPRTO14522 1441 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 RC3H1Q5TC82 1133 aaKnown RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 SIX6OS1Q8N1H7 587 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 THEM5Q8N1Q8 247 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 C7orf31Q8N865 590 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 MGARPQ8TDB4 240 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 CCDC51Q96ER9 411 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 MAD1L1Q9Y6D9 718 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 MYO3BQ8WXR4 1341 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 KRIT1O00522 736 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 SSH3Q8TE77 659 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 DISP1Q96F81 1524 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 HGSO14964 777 aaPredicted RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 ATF2P15336 505 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 ADD1P35611 737 aaKnown RBP14.15□□□□□ -0.14
NLRC3-202ENST00000359128 OSTNP61366 133 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 PTGDRQ13258 359 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 EXOC3L4Q17RC7 722 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 URGCPQ8TCY9 931 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 PGBD1Q96JS3 809 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 PIGSQ96S52 555 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 TMEM206Q9H813 350 aa14.15□□□□□ -0.14
NLRC3-202ENST00000359128 ZBBXA8MT70 800 aa14.15□□□□□ -0.15
NLRC3-202ENST00000359128 BUB1O43683 1085 aa14.15□□□□□ -0.15
NLRC3-202ENST00000359128 PTH1RQ03431 593 aa14.15□□□□□ -0.15
NLRC3-202ENST00000359128 TAB3Q8N5C8 712 aaPredicted RBP14.15□□□□□ -0.15
NLRC3-202ENST00000359128 FAM81BQ96LP2 452 aa14.15□□□□□ -0.15
NLRC3-202ENST00000359128 DPYSL4O14531 572 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 PDXDC2PQ6P474 469 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 RAPH1Q70E73 1250 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 B4GALNT4Q76KP1 1039 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 APOBEC3FQ8IUX4 373 aaKnown RBP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 USP44Q9H0E7 712 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 EIF3CLB5ME19 914 aaKnown RBP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 ARHGAP6O43182 974 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 CIITAP33076 1130 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 ARHGEF25Q86VW2 580 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 VSIG1Q86XK7 387 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 TRIM11Q96F44 468 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 EIF3CQ99613 913 aaKnown RBP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 BCAP29Q9UHQ4 241 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 F8W8V4 182 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 PPFIA1Q13136 1202 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 MFSD14CQ5VZR4 134 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 RNF207Q6ZRF8 634 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 SRGAP2CP0DJJ0 459 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 TROVE2P10155 538 aaKnown RBP eCLIP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 ANKRD42Q8N9B4 389 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 PPME1Q9Y570 386 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 DENND3A2RUS2 1198 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 GCFC2P16383 781 aaKnown RBP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 NAA25Q14CX7 972 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 TRIM58Q8NG06 486 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 LARP4BQ92615 738 aaKnown RBP14.14□□□□□ -0.15
NLRC3-202ENST00000359128 PLEKHA4Q9H4M7 779 aa14.14□□□□□ -0.15
NLRC3-202ENST00000359128 IQCB1Q15051 598 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 SURF1Q15526 300 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 CDC37Q16543 378 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms