RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 KCNQ3O43525 872 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 LONP1P36776 959 aaKnown RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 MYLK4Q86YV6 388 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 DCPSQ96C86 337 aaKnown RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 KRT26Q7Z3Y9 468 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 TRIM37O94972 964 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 CASP14P31944 242 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 CACNB1Q02641 598 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-202ENST00000359082 SNCBQ16143 134 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 FAM26FQ5R3K3 315 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 ODR4Q5SWX8 454 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 NUB1Q9Y5A7 615 aa20.01■□□□□ 0.79
SHANK1-202ENST00000359082 PHEXP78562 749 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 PTK2Q05397 1052 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 SCRN1Q12765 414 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 PI4K2BQ8TCG2 481 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 PSDA5PKW4 1024 aaPredicted RBP20■□□□□ 0.79
SHANK1-202ENST00000359082 ACTN1P12814 892 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 IFNAR2P48551 515 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 TFDP1Q14186 410 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 ABCB5Q2M3G0 1257 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 GPC4O75487 556 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 HP1BP3Q5SSJ5 553 aaPredicted RBP20■□□□□ 0.79
SHANK1-202ENST00000359082 TRIML1Q8N9V2 468 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 PGBD1Q96JS3 809 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 PPP1R13BQ96KQ4 1090 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 C2orf54Q08AI8 447 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 GALNT17Q6IS24 598 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 ABCF3Q9NUQ8 709 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 PALD1Q9ULE6 856 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 TMED2Q15363 201 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 SPICE1Q8N0Z3 855 aa20■□□□□ 0.79
SHANK1-202ENST00000359082 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 SRGAP2BP0DMP2 458 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 DYNLT1P63172 113 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 CDR2Q01850 454 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 ATP6V1E2Q96A05 226 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 ZNF577Q9BSK1 485 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 ZSWIM6Q9HCJ5 1215 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 XAB2Q9HCS7 855 aaKnown RBP19.99■□□□□ 0.79
SHANK1-202ENST00000359082 PPP1R9AQ9ULJ8 1098 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 EPN1Q9Y6I3 576 aaPredicted RBP19.99■□□□□ 0.79
SHANK1-202ENST00000359082 GNGT2O14610 69 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 SEC31AO94979 1220 aaKnown RBP19.99■□□□□ 0.79
SHANK1-202ENST00000359082 LRCH2Q5VUJ6 765 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 DCAF15Q66K64 600 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 TTLL7Q6ZT98 887 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 HAUS4Q9H6D7 363 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 FGAP02671 866 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 IL9RQ01113 521 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 ARHGAP27Q6ZUM4 889 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 RUNDC3BQ96NL0 473 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 RBL2Q08999 1139 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 Q3C1V9 767 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 PCIF1Q9H4Z3 704 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 FAF1Q9UNN5 650 aaPredicted RBP19.99■□□□□ 0.79
SHANK1-202ENST00000359082 PSPC1Q8WXF1 523 aaKnown RBP19.99■□□□□ 0.79
SHANK1-202ENST00000359082 MTMR6Q9Y217 621 aa19.99■□□□□ 0.79
SHANK1-202ENST00000359082 MAPK4P31152 587 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 NLRP7Q8WX94 980 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 HNRNPDLO14979 420 aaKnown RBP19.98■□□□□ 0.79
SHANK1-202ENST00000359082 PPFIA2O75334 1257 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 XPAP23025 273 aaPredicted RBP19.98■□□□□ 0.79
SHANK1-202ENST00000359082 LRRC41Q15345 812 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 MAP7D3Q8IWC1 876 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 NT5C1BQ96P26 610 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 PABPC4Q13310 644 aaKnown RBP eCLIP19.98■□□□□ 0.79
SHANK1-202ENST00000359082 ZBTB38Q8NAP3 1195 aaPredicted RBP19.98■□□□□ 0.79
SHANK1-202ENST00000359082 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 M0R2C6 588 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 CCNYQ8ND76 341 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 CFAP36Q96G28 342 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 UBN1Q9NPG3 1134 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 PCDHA1Q9Y5I3 950 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 GSTA4O15217 222 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 CPP00450 1065 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 IQCB1Q15051 598 aa19.98■□□□□ 0.79
SHANK1-202ENST00000359082 SPATS2Q86XZ4 545 aaKnown RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ZNF653Q96CK0 615 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 SLC38A10Q9HBR0 1119 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 LARSQ9P2J5 1176 aaKnown RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ZNF215Q9UL58 517 aaPredicted RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 ZMYND10O75800 440 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 PDIA3P30101 505 aaKnown RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 CCT5P48643 541 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 STX1BP61266 288 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 SMYD4Q8IYR2 804 aaPredicted RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 SLC35F6Q8N357 371 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 RASGRP4Q8TDF6 673 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 MAGOHBQ96A72 148 aaKnown RBP19.97■□□□□ 0.79
SHANK1-202ENST00000359082 TUBGCP2Q9BSJ2 902 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 NBPF3Q9H094 633 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 KRT1P04264 644 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 GPR162Q16538 588 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 SNX25Q9H3E2 840 aa19.97■□□□□ 0.79
SHANK1-202ENST00000359082 NVLO15381 856 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms