RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 FBXO2Q9UK22 296 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 HPSEQ9Y251 543 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 PCDHA1Q9Y5I3 950 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 STK24Q9Y6E0 443 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 TMEM232C9JQI7 657 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 M0R2N6 131 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 OSBPP22059 807 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 MCM7P33993 719 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 PTGDRQ13258 359 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 ZNF174Q15697 407 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 NPY5RQ15761 445 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 CDC37Q16543 378 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 ZNF333Q96JL9 665 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 GABRQQ9UN88 632 aa12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 CTDP1Q9Y5B0 961 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC4-201ENST00000359005 BECN2A8MW95 431 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 NEMFO60524 1076 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 MTFR1Q15390 333 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 CT47A1Q5JQC4 288 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 SHC4Q6S5L8 630 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 CKAP2LQ8IYA6 745 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 SAMD3Q8N6K7 520 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 RASSF8Q8NHQ8 419 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 PARK7Q99497 189 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 WDR18Q9BV38 432 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 RBSNQ9H1K0 784 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 CUEDC2Q9H467 287 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 MAGEF1Q9HAY2 307 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 SRRDQ9UH36 339 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
TRAPPC4-201ENST00000359005 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 SMTNL1A8MU46 457 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 USP17L10C9JJH3 530 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 SLC26A4O43511 780 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 MARCH6O60337 910 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 CCNT1O60563 726 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 MYL1P05976 194 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 UBA7P41226 1012 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 USP11P51784 963 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 PRKCZQ05513 592 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 MTMR2Q13614 643 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 INF2Q27J81 1249 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 QRICH1Q2TAL8 776 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 TRIML1Q8N9V2 468 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 LRRC27Q9C0I9 530 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 KIAA1683Q9H0B3 1180 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-201ENST00000359005 ABCB11O95342 1321 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 HOXA7P31268 230 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 SLC16A2P36021 539 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 ZNF165P49910 485 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 BACE1P56817 501 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 LETM2Q2VYF4 491 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 ANO6Q4KMQ2 910 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 MOXD1Q6UVY6 613 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 SIAH1Q8IUQ4 282 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 ANKRD13CQ8N6S4 541 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 ACER1Q8TDN7 264 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 TBCKQ8TEA7 893 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 COA7Q96BR5 231 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 CLIC6Q96NY7 704 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 MAF1Q9H063 256 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 CSRNP2Q9H175 543 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 TXNRD2Q9NNW7 524 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 RMND1Q9NWS8 449 aa12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 BIN2Q9UBW5 565 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-201ENST00000359005 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 C19orf81C9J6K1 198 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 TPM3P06753 285 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 SLFN14P0C7P3 912 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 NLRP12P59046 1061 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 AMPD3Q01432 767 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 PDIA5Q14554 519 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 DHX8Q14562 1220 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 SLC35G1Q2M3R5 365 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 SLC9C1Q4G0N8 1177 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 HS1BP3Q53T59 392 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 JAKMIP3Q5VZ66 844 aa12.14□□□□□ -0.47
TRAPPC4-201ENST00000359005 TTBK2Q6IQ55 1244 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms