RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 JDP2Q8WYK2 163 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MPP4Q96JB8 637 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 PLIN2Q99541 437 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 IQCA1LA6NCM1 817 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CDR2Q01850 454 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MAEAQ7L5Y9 396 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 ZNF518AQ6AHZ1 1483 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 RAPGEF1Q13905 1077 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 NOP9Q86U38 636 aaKnown RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 SLC26A6Q9BXS9 759 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 L1RE1Q9UN81 338 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 ATP5HO75947 161 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 P3H1Q32P28 736 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 SH2D4AQ9H788 454 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CCDC87Q9NVE4 849 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 FANCAO15360 1455 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MROH7-TTC4A0A0A0MT08 1334 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CETN2P41208 172 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 NLRP6P59044 892 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 TNIP1Q15025 636 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 RPS6KA1Q15418 735 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MAP3K21Q5TCX8 1036 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 NMD3Q96D46 503 aaKnown RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 RNF17Q9BXT8 1623 aaKnown RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 ADCK5Q3MIX3 580 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 ENAHQ8N8S7 591 aaPredicted RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 ATL2Q8NHH9 583 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 DPH5Q9H2P9 285 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MLXIPLQ9NP71 852 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 LARGE1O95461 756 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 STMN1P16949 149 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 TMEM132EQ6IEE7 984 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CHMP7Q8WUX9 453 aaPredicted RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 MMS19Q96T76 1030 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 SH3GL1Q99961 368 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 TMEM60Q9H2L4 133 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 SCINQ9Y6U3 715 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 SPHKAPQ2M3C7 1700 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 CCDC169A6NNP5 214 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 OR8K1Q8NGG5 319 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MAGEC3Q8TD91 643 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 RBM41Q96IZ5 413 aaKnown RBP7.56□□□□□ -1.2
NF1-202ENST00000358273 ANGPTL3Q9Y5C1 460 aa7.56□□□□□ -1.2
NF1-202ENST00000358273 MED14O60244 1454 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 LONP1P36776 959 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 MAGEA8P43361 318 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 RCN1Q15293 331 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 OTUD7BQ6GQQ9 843 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 CDC42BPAQ5VT25 1732 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 IFT140Q96RY7 1462 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 PSMA7O14818 248 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 DCTN3O75935 186 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 NDUFA10O95299 355 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 KRT75O95678 551 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 ACADSP16219 412 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 EIF2B2P49770 351 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 C8orf58Q8NAV2 365 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 ZNF229Q9UJW7 825 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 KIF24Q5T7B8 1368 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 NOS1P29475 1434 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 SPDYE3A6NKU9 549 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 CACNA2D1P54289 1103 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 EHHADHQ08426 723 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 CALCOCO2Q13137 446 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 SMYD3Q9H7B4 428 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 MAGI3Q5TCQ9 1506 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 BUB1O43683 1085 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 SPAG7O75391 227 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 FESP07332 822 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 TCP1P17987 556 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 CTNNA2P26232 953 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 ABL2P42684 1182 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 ASIC1P78348 528 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 EIF2AQ9BY44 585 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 SMNDC1O75940 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
NF1-202ENST00000358273 ALOX15P16050 662 aaPredicted RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 DMAP1Q9NPF5 467 aaPredicted RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 KCND1Q9NSA2 647 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 DNAAF2Q9NVR5 837 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 NDC80O14777 642 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 TRIM65Q6PJ69 517 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 SMCR8Q8TEV9 937 aaPredicted RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 DDX28Q9NUL7 540 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 RTEL1Q9NZ71 1219 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 ZNF318Q5VUA4 2279 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 IARSP41252 1262 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 THOC7Q6I9Y2 204 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 IRX2Q9BZI1 471 aaPredicted RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 PEX26Q7Z412 305 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 PGBD1Q96JS3 809 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 PLEKHG4BQ96PX9 1271 aa7.55□□□□□ -1.2
NF1-202ENST00000358273 PRMT1Q99873 361 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 PYM1Q9BRP8 204 aaKnown RBP7.55□□□□□ -1.2
NF1-202ENST00000358273 RABL2AQ9UBK7 228 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms