RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ENTPD3O75355 529 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 CDC25AP30304 524 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 CBX1P83916 185 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 NAA30Q147X3 362 aaPredicted RBP16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 UTP14CQ5TAP6 766 aaKnown RBP16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 SH3BP5LQ7L8J4 393 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 CCSER1Q9C0I3 900 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
NIPAL3-203ENST00000358028 ESYT2A0FGR8 921 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 PDHBP11177 359 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 AKR1B1P15121 316 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 FKBP1BP68106 108 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 FILIP1LQ4L180 1135 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 ASPRV1Q53RT3 343 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 DNAI1Q9UI46 699 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 RWDD2AQ9UIY3 292 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 DDTLA6NHG4 134 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 AKR1B15C9JRZ8 316 aaPredicted RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 TPM1P09493 284 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 OR52Z1P0C646 297 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 UBA7P41226 1012 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 ELF2Q15723 593 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 NAALADL2Q58DX5 795 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 CCDC51Q96ER9 411 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 ADD3Q9UEY8 706 aaKnown RBP16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 ATRNL1Q5VV63 1379 aa16.05■□□□□ 0.16
NIPAL3-203ENST00000358028 FRMPD2Q68DX3 1309 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 PPP1R12BO60237 982 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 SLURP2P0DP57 97 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 PBX1P40424 430 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 MAP2K1Q02750 393 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 SPAG1Q07617 926 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 PAK1Q13153 545 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 GRM1Q13255 1194 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 ORC2Q13416 577 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 KMT5BQ4FZB7 885 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 NEK8Q86SG6 692 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 PPFIBP1Q86W92 1011 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 DOCK1Q14185 1865 aa16.04■□□□□ 0.16
NIPAL3-203ENST00000358028 TEX33O43247 280 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 USP2O75604 605 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 MYL1P05976 194 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 CTCFP49711 727 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 ARMC9Q7Z3E5 817 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 NELFBQ8WX92 580 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 AK8Q96MA6 479 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 CSRNP1Q96S65 589 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 SERPINB13Q9UIV8 391 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 H2AFXP16104 143 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 MAP2K2P36507 400 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 DMTNQ08495 405 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 KCNB1Q14721 858 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 RGMBQ6NW40 437 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 LIMA1Q9UHB6 759 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-203ENST00000358028 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 AOC2O75106 756 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 TTLL1O95922 423 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 ZSCAN20P17040 1043 aaPredicted RBP16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 SHMT1P34896 483 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 LDLRAD1Q5T700 205 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 CABP7Q86V35 215 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 TBCKQ8TEA7 893 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 CLMNQ96JQ2 1002 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 MAGEF1Q9HAY2 307 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 KBTBD4Q9NVX7 518 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 TMEM260Q9NX78 707 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 BIN2Q9UBW5 565 aaPredicted RBP16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 GDAQ9Y2T3 454 aa16.02■□□□□ 0.15
NIPAL3-203ENST00000358028 LRRC10BA6NIK2 292 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 EFCAB8A8MWE9 144 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 COBLO75128 1261 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms