RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DZIP3Q86Y13 1208 aaKnown RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ENGASEQ8NFI3 743 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 FTOQ9C0B1 505 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 DRC3Q9H069 523 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 NOD2Q9HC29 1040 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 BYSLQ13895 437 aaKnown RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 BEND3Q5T5X7 828 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ABTB2Q8N961 1025 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 KLHL23Q8NBE8 558 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 SYNCQ9H7C4 482 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 SALL3Q9BXA9 1300 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ARHGAP10A1A4S6 786 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 DDX21Q9NR30 783 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 CORO1CQ9ULV4 474 aaPredicted RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 AP1G2O75843 785 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 MDH1P40925 334 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 TRAPPC11Q7Z392 1133 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 KRT25Q7Z3Z0 450 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CSGALNACT2Q8N6G5 542 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 B4GALNT2Q8NHY0 566 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 SUGCTQ9HAC7 445 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 MYH7BA7E2Y1 1941 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 LAMA4Q16363 1823 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 THAP12O43422 761 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 AGTP01019 485 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 EIF2S1P05198 315 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 YY1P25490 414 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 GSTO1P78417 241 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 FKBP4Q02790 459 aaKnown RBP eCLIP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PAIP2BQ9ULR5 123 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CRB1P82279 1406 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 LRRIQ3A6PVS8 624 aaPredicted RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PDIA3P30101 505 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PAPOLAP51003 745 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 GUCY2DQ02846 1103 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 LCA5Q86VQ0 697 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 FERMT1Q9BQL6 677 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.18□□□□□ -1.266e-6■■■■■ 48.1
TRIM38-201ENST00000357085 KLHL33A6NCF5 533 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 POLR2DO15514 142 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CTNND1O60716 968 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PECAM1P16284 738 aaPredicted RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 ZNF658Q5TYW1 1059 aaPredicted RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CAND2O75155 1236 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 HEXIM1O94992 359 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 FMNL1O95466 1100 aaPredicted RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PHBP35232 272 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 KCNB1Q14721 858 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CFAP157Q5JU67 520 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CENPTQ96BT3 561 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 TRIM11Q96F44 468 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 ZMAT2Q96NC0 199 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 LIMA1Q9UHB6 759 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CLIC4Q9Y696 253 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 ERBB3P21860 1342 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 TNRQ92752 1358 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 BICD1Q96G01 975 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PLAAQ9Y263 795 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 WFS1O76024 890 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CTCFP49711 727 aaPredicted RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 TERB1Q8NA31 727 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 TAB2Q9NYJ8 693 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CIDEBQ9UHD4 219 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 A0A0D9SFI3 127 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 FAM237AA0A1B0GTK4 181 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 CCDC160A6NGH7 325 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 MRC1P22897 1456 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PAPD7Q5XG87 772 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PEX26Q7Z412 305 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 ARHGAP22Q7Z5H3 698 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 TTC25Q96NG3 672 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 PAPOLBQ9NRJ5 636 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
TRIM38-201ENST00000357085 SRPRBQ9Y5M8 271 aaKnown RBP7.18□□□□□ -1.26
TRIM38-201ENST00000357085 DTNBO60941 627 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 TBCAO75347 108 aaKnown RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 PDHBP11177 359 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 FIGNQ5HY92 759 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 TTC38Q5R3I4 469 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 TBC1D1Q86TI0 1168 aaPredicted RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 GSPT2Q8IYD1 628 aaKnown RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 AENQ8WTP8 325 aaKnown RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 CEP63Q96MT8 703 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 NDE1Q9NXR1 346 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 HACD3Q9P035 362 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 STK17AQ9UEE5 414 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 C15orf41Q9Y2V0 281 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 CASQ2O14958 399 aaPredicted RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 TOB2Q14106 344 aaPredicted RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 ACBD5Q5T8D3 534 aaPredicted RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 ANKRD13DQ6ZTN6 518 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 LTV1Q96GA3 475 aaPredicted RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 TRPC6Q9Y210 931 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 KDM3BQ7LBC6 1761 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 ASAP2O43150 1006 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 DHX34Q14147 1143 aaKnown RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 SYDE1Q6ZW31 735 aaPredicted RBP7.17□□□□□ -1.26
TRIM38-201ENST00000357085 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
TRIM38-201ENST00000357085 PODXLO00592 558 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms