RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 CALML4Q96GE6 196 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 CDK5RAP3Q96JB5 506 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
PGBD2-202ENST00000355360 ZNF831Q5JPB2 1677 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 ATP2B4P23634 1241 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 TRIM14Q14142 442 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 TSR1Q2NL82 804 aaKnown RBP15.68■□□□□ 0.1
PGBD2-202ENST00000355360 BEND6Q5SZJ8 279 aaPredicted RBP15.68■□□□□ 0.1
PGBD2-202ENST00000355360 GALNT17Q6IS24 598 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 ADGRF4Q8IZF3 695 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 MMRN2Q9H8L6 949 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 JMJD4Q9H9V9 463 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 ZNF287Q9HBT7 754 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 SMARCAL1Q9NZC9 954 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
PGBD2-202ENST00000355360 ADCY7P51828 1080 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 KCTD19Q17RG1 926 aaPredicted RBP15.67■□□□□ 0.1
PGBD2-202ENST00000355360 SV2BQ7L1I2 683 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 JAKMIP2Q96AA8 810 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 MTMR9Q96QG7 549 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 C7orf25Q9BPX7 421 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 RIOX1Q9H6W3 641 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 FAM170AA1A519 330 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 LARP4BQ92615 738 aaKnown RBP15.67■□□□□ 0.1
PGBD2-202ENST00000355360 DHTKD1Q96HY7 919 aaPredicted RBP15.67■□□□□ 0.1
PGBD2-202ENST00000355360 RBM17Q96I25 401 aaKnown RBP15.67■□□□□ 0.1
PGBD2-202ENST00000355360 MLXIPQ9HAP2 919 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
PGBD2-202ENST00000355360 CCDC151A5D8V7 595 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 LAD1O00515 517 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 ENOX2Q16206 610 aaKnown RBP15.66■□□□□ 0.1
PGBD2-202ENST00000355360 C2CD5Q86YS7 1000 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 FNBP4Q8N3X1 1017 aaPredicted RBP15.66■□□□□ 0.1
PGBD2-202ENST00000355360 DDX12PQ92771 950 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 LZTS2Q9BRK4 669 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 USP40Q9NVE5 1235 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 A0A1W2PQC6 194 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 CXCR5P32302 372 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
PGBD2-202ENST00000355360 AK8Q96MA6 479 aa15.66■□□□□ 0.1
PGBD2-202ENST00000355360 PDE2AO00408 941 aaPredicted RBP15.65■□□□□ 0.1
PGBD2-202ENST00000355360 STAT3P40763 770 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 FKBP15Q5T1M5 1219 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 SLC30A10Q6XR72 485 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 CRACR2AQ9BSW2 395 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 SMCHD1A6NHR9 2005 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 E9PMD0 336 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 MARCH6O60337 910 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 DNA2P51530 1060 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 TMC4Q7Z404 712 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 UBXN6Q9BZV1 441 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 TANGO6Q9C0B7 1094 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 PLEKHA4Q9H4M7 779 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.65■□□□□ 0.1
PGBD2-202ENST00000355360 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 CAPN6Q9Y6Q1 641 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 GAKO14976 1311 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 ZBTB22O15209 634 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 TRIM37O94972 964 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 SEPT12Q8IYM1 358 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 ZHX3Q9H4I2 956 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 BCAS3Q9H6U6 928 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 DBNDD1Q9H9R9 158 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 JADE2Q9NQC1 790 aa15.65■□□□□ 0.1
PGBD2-202ENST00000355360 NHSQ6T4R5 1651 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 LRRIQ3A6PVS8 624 aaPredicted RBP15.64■□□□□ 0.09
PGBD2-202ENST00000355360 CYP2C19P33261 490 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 MEX3CQ5U5Q3 659 aaKnown RBP15.64■□□□□ 0.09
PGBD2-202ENST00000355360 TRAPPC11Q7Z392 1133 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 HAS1Q92839 578 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 CCDC47Q96A33 483 aaKnown RBP15.64■□□□□ 0.09
PGBD2-202ENST00000355360 GJD4Q96KN9 370 aaPredicted RBP15.64■□□□□ 0.09
PGBD2-202ENST00000355360 VPS18Q9P253 973 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 BICDL2A1A5D9 508 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 SHMT1P34896 483 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 GABPAQ06546 454 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 C2orf54Q08AI8 447 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 CNNM4Q6P4Q7 775 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 RRAGAQ7L523 313 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 MSANTD4Q8NCY6 345 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 NDST4Q9H3R1 872 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 SERPINB13Q9UIV8 391 aa15.64■□□□□ 0.09
PGBD2-202ENST00000355360 PPEF1O14829 653 aaPredicted RBP15.63■□□□□ 0.09
PGBD2-202ENST00000355360 MOCS3O95396 460 aa15.63■□□□□ 0.09
PGBD2-202ENST00000355360 MYBL2P10244 700 aa15.63■□□□□ 0.09
PGBD2-202ENST00000355360 PLCG2P16885 1265 aa15.63■□□□□ 0.09
PGBD2-202ENST00000355360 MATR3P43243 847 aaKnown RBP eCLIP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms