RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 KIAA0895Q8NCT3 520 aa15.38■□□□□ 0.05
EBF3-201ENST00000355311 IKZF4Q9H2S9 585 aa15.38■□□□□ 0.05
EBF3-201ENST00000355311 LIMA1Q9UHB6 759 aaKnown RBP15.38■□□□□ 0.05
EBF3-201ENST00000355311 CDC23Q9UJX2 597 aa15.38■□□□□ 0.05
EBF3-201ENST00000355311 RASSF10A6NK89 507 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 NCK2O43639 380 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 SRGAP1Q7Z6B7 1085 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 GPR161Q8N6U8 529 aaKnown RBP15.37■□□□□ 0.05
EBF3-201ENST00000355311 OR8K1Q8NGG5 319 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 CAGE1Q8TC20 777 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 SNX29Q8TEQ0 813 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 NAPGQ99747 312 aaPredicted RBP15.37■□□□□ 0.05
EBF3-201ENST00000355311 SEMA6BQ9H3T3 888 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 HERVK_113P62684 666 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 SLC7A5Q01650 507 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 CALCRLQ16602 461 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 RSRC2Q7L4I2 434 aaKnown RBP15.37■□□□□ 0.05
EBF3-201ENST00000355311 TBC1D16Q8TBP0 767 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 USP40Q9NVE5 1235 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 NID2Q14112 1375 aa15.37■□□□□ 0.05
EBF3-201ENST00000355311 E9PMD0 336 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 GDF11O95390 407 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 KCNJ6P48051 423 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 RCAN1P53805 252 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 RHBDL3P58872 404 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
EBF3-201ENST00000355311 TTC31Q49AM3 519 aaPredicted RBP15.36■□□□□ 0.05
EBF3-201ENST00000355311 TTI2Q6NXR4 508 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 CERS5Q8N5B7 392 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.05
EBF3-201ENST00000355311 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
EBF3-201ENST00000355311 DAGLAQ9Y4D2 1042 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 M0R2N6 131 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 UBXN2AP68543 259 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 STIM1Q13586 685 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 TMTC1Q8IUR5 882 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 EXOC4Q96A65 974 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 H7C1D1 291 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 SEMA3EO15041 775 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 PPP1R11O60927 126 aaPredicted RBP15.36■□□□□ 0.05
EBF3-201ENST00000355311 PDHBP11177 359 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 GYS1P13807 737 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 C2orf54Q08AI8 447 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 RRAGAQ7L523 313 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 MTA3Q9BTC8 594 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 NHEJ1Q9H9Q4 299 aaPredicted RBP15.36■□□□□ 0.05
EBF3-201ENST00000355311 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
EBF3-201ENST00000355311 BCORQ6W2J9 1755 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 CTAGE15A4D2H0 777 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 CTAGE8P0CG41 777 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 CTAGE6Q86UF2 777 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 FCHSD1Q86WN1 690 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 CTAGE4Q8IX94 777 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 P2RX5Q93086 422 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 DEF6Q9H4E7 631 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 RMND1Q9NWS8 449 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 MYH10P35580 1976 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 MYO1BO43795 1136 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 DDR1Q08345 913 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 TMED8Q6PL24 325 aaPredicted RBP15.35■□□□□ 0.05
EBF3-201ENST00000355311 ADGRF4Q8IZF3 695 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 GOLPH3Q9H4A6 298 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
EBF3-201ENST00000355311 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
EBF3-201ENST00000355311 EDIL3O43854 480 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 MOCS3O95396 460 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 LDHCP07864 332 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 TRAPPC10P48553 1259 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 CYP4A11Q02928 519 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 GRB10Q13322 594 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
EBF3-201ENST00000355311 ARL6IP4Q66PJ3 421 aaKnown RBP15.34■□□□□ 0.05
EBF3-201ENST00000355311 DDX12PQ92771 950 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 CALML4Q96GE6 196 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 DOCK2Q92608 1830 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 LGALS16A8MUM7 142 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 ZNF263O14978 683 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 GIMAP8Q8ND71 665 aaPredicted RBP15.34■□□□□ 0.05
EBF3-201ENST00000355311 HDAC7Q8WUI4 952 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 JAKMIP2Q96AA8 810 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 CNTNAP4Q9C0A0 1308 aa15.34■□□□□ 0.05
EBF3-201ENST00000355311 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.05
EBF3-201ENST00000355311 PDE2AO00408 941 aaPredicted RBP15.33■□□□□ 0.05
EBF3-201ENST00000355311 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.05
EBF3-201ENST00000355311 TBC1D10BQ4KMP7 808 aaPredicted RBP15.33■□□□□ 0.05
EBF3-201ENST00000355311 TDRD12Q587J7 1177 aaKnown RBP15.33■□□□□ 0.05
EBF3-201ENST00000355311 DNAJC21Q5F1R6 531 aaKnown RBP15.33■□□□□ 0.05
EBF3-201ENST00000355311 SEPT12Q8IYM1 358 aa15.33■□□□□ 0.05
EBF3-201ENST00000355311 NOC3LQ8WTT2 800 aaKnown RBP15.33■□□□□ 0.05
EBF3-201ENST00000355311 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.05
EBF3-201ENST00000355311 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.05
EBF3-201ENST00000355311 GNAQP50148 359 aa15.33■□□□□ 0.04
EBF3-201ENST00000355311 GSTO1P78417 241 aa15.33■□□□□ 0.04
EBF3-201ENST00000355311 TTC19Q6DKK2 380 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms